Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00146 ATGGCTGATTTAGGCTCAGCCTCTTCCAGGAGAATGTGGTGTTCCATTCCTGAAAGAATGCAGCTGCATGTGGCCATGCTGGCCTTGCAGTTTGGCTATGCCGGCTTCCATGTTGTCTCAAGAGCTGCACTTAACATGGGTGTCAGCAAACTTGTTTTCCCAGTCTATCGTAACATCATTGCCTTGCTTCTTCTCCTTCCCTTCGCCTACTTCTTGGAAAAGAAGGAGAGGCCAGCTATCAGTTTAAACTTTGCCTGCCAGTTCTTTCTTCTGGCACTTGTTGGGATCACAGCAAATCAAGGTTTTTACTTGCTTGGTTTGGAGAACACATCTCCTACCTTCGCATCAGCAATACAGAACTCTGTCCCAGCCATTACATTCCTCATGGCAGCCATTTTCAGAATAGAGCAAGTGAGATTGAACCGAAAAGATGGGATTGCAAAGGTGGCGGGAACCCTTTTGTGTGTGGTTGGGGCCACTGTGATCACACTTTACAAAGGTCCAACAATATACAGCCCAGGAACCCGTGTGAACAGCATCAACAGCAACACAATAACAACACCAGTGTTTGATTTTGGAACGCTCTCTCTTGGAGATGCAAAGGGAAAGAACTGGACCCTGGGGTGCTTGTACCTGATTGGACACTGCTTGTCTTGGTCTGGTTGGCTTGTGCTGCAAGCACCAGTTCTGAAGAAGTACCCTGCTCGTCTCTCTTTCACTTCCTACACCTGTTTCTTTGGACTCTTGCAGTTCCTGGTCATTGCTTTGGTCCTTGAAAGAGATGCACAGGCTTGGCTTTTCCACTCTGGTGGAGAAGCTTTCACAATTTTATATGCGGGAGTGGTGGCATCAGGAATTGCCTTCGCTGTACAAATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTTGCCGTGTATCAACCTGTTCAGACTTTTGTTGTCGCCATCATGGCAACCATAGCTTTAGGAGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGTGTTGATTGTATCGGGACTGTACTTTGTTTTGTGGGGTAAAAGTGAAGAGAGGAAATTTGCTAGAGAACAGCTTGCGATTGCATCCACCACTGATCATAGCATCATTAGGCCTGCAAGCCACGCCAAAGCATCACTTGCTCAGCCACTTCTTTCTTCATCAACAGAACATGTCTGA 1179 0.4716 MADLGSASSRRMWCSIPERMQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAISLNFACQFFLLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEQVRLNRKDGIAKVAGTLLCVVGATVITLYKGPTIYSPGTRVNSINSNTITTPVFDFGTLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSFTSYTCFFGLLQFLVIALVLERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMATIALGEEFYLGGIIGAVLIVSGLYFVLWGKSEERKFAREQLAIASTTDHSIIRPASHAKASLAQPLLSSSTEHV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00146 392 PANTHER WAT1-RELATED PROTEIN 24 357 IPR030184 GO:0016020|GO:0022857
Viun8g00146 392 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020
Viun8g00146 392 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Viun8g00146 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 350 - -
Viun8g00146 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00146 Viun-Chr8 964176 967307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00146 1 392 Nodulin-like Gene Family AT1G75500 72.932 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00146 - - gmx:100792395 699.893