Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00125 ATGTCCGCAAAATGCAGCCAAATCCGACACATCGTTCAGCTCCGCCAGATGCTGCGGCGCTGGCGCAACAAGGCACGCATGTCCGCAAACCGCACACCGTCAGATGTGCCTGCAGGACACGTGGCGGTCTGCGTAGGCACCAACCTCACCAGATTCGTGGTGCGCGCAACTTACCTGAACCACCCCGTCTTCAAGAAGCTTCTCCTTCAAGCCGAAGAAGAGTACGGTTTCTCCAACCACGGTCCATTGGTCATCCCCTGCGACGAAATGCTCTTCCACGAGGTTCTCCGGTTCATCTCCTGGTCCGAATCAGCAAAACCGAACCGGTTCGTAAACCTCGAACTTGACGACTTGAAACAACGTTGCCACATCAGAATCAACAACAACCTCGATTTCTGGCCAGAATCTAGACCGCTCCTACACGGTCCCAGTGACAAAACCGTGTGGTAA 450 0.5467 MSAKCSQIRHIVQLRQMLRRWRNKARMSANRTPSDVPAGHVAVCVGTNLTRFVVRATYLNHPVFKKLLLQAEEEYGFSNHGPLVIPCDEMLFHEVLRFISWSESAKPNRFVNLELDDLKQRCHIRINNNLDFWPESRPLLHGPSDKTVW 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00125 149 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 95 IPR003676 GO:0009733
Viun8g00125 149 Pfam Auxin responsive protein 14 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00125 Viun-Chr8 751944 753046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00125 3 148 Calmodulin-binding Proteins AT4G34750 48.026 5.36e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00125 K14488 - gmx:100782525 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00125 8 751944 753046 Viun9g03656 9 41925579 41926287 PCT