Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00093 ATGGCCAACAAGGGAAGTCCAATGCATGAGAAGATGCAGAAAAACCTTTGCACACAACTTGCTGTTGCAGTGAGAAGCATTCAATGGAGTTATGGGATCTTCTGGGCACCTTCAACCACTGAAGAAAGGGTGCTGGAATGGAGAGAAGGGTACTACAATGGAGACATCAAGACAAGAAAAACTGTTCAAGCCATGGAATTGGAAATGAAAGCTGATAAAATAGGTCTGCAGAGGAGTGAGCAATTGAAGGAACTATACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGATCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCGGTCACAATCAAAGTAGTTTGCCGGGGAGAACACTGGAAATTGGTGACACAATCTGGTTATGCGATGCTCAACATGCAGACAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGGTTGGATTTTACTTCTGA 507 0.43 MANKGSPMHEKMQKNLCTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFGHNQSSLPGRTLEIGDTIWLCDAQHADSKIFSRSLLAKVGFYF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00093 168 PANTHER TRANSCRIPTION FACTOR TT8 10 163 - -
Viun8g00093 168 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 163 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00093 Viun-Chr8 504086 505584 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00093 14 163 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 60.377 6.28e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00093 - - vun:114194115 346.28