Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00080 ATGGTTCTTTCTTCTTCTTCTTCTTTTTCTCAGTCTCTTCCTTCCAACATGCTTTGTTTTGCATTGTTGGTGTTATCTGTTTCCTTAAAAACAAAAGCTTTGTTGAAACTACCACCGAATGTGTCTGTTCCGGCAGTGTTTGTGTTCGGAGATTCAGTGGTGGACACCGGCAACAACAACAACAGAACGACATCGTTTGCTAGGTCTAATTTCGCTCCTTATGGGAGAGACTTTGAAGGTGGCGTTCCAACCGGTAGATTTAGCAATGGAAAGGTTCCATCAGACCTTATAGTGGAAGAGTTGGGAATTAAGGAGCTTCTGCCAGCATATTTAAAGCCAAATCTGGAGGGTAGTGATTTGGTGACAGGGGTCTGTTTTGCTTCAGGTGGCTCAGGATACGACCCTTTGACTTCCATATTAGAGGGATCAATGGCGTTAAGTGGGCAACTTGATCTGTTCAAAGAATACACAGTGAAATTGAAAGGTTTGGTCGGAGACGAGAGAGCAAAGTTCATCATAGCAAATAGTCTCTTCATTGTGGTAGCAGGAAGCAGTGACATTTCCAACACCTATCGCACTCGTTCTCTCCTCTACGATCCTCCTTCTTACTCCGATCTTCTCCTTAACTCAGCTTCCACCTTCTTAACGGAATTGAATGAGTTAGGTGCGAGGAGGATTGCGGTATTCAGTGCACCTCCAATCGGGTGTTTGCCGTTTCAGAGAACAGTGGGTGGAGGAATAGAGAAAAAGTGTGCACCGAGGCCCAACAACTTGGCCCAATTATTTAACACCAAATTGTCCAATCTCGTGGGTTCTCTCAATCGTAACTTTCCCAGTAGCAGAAATGTTTTCATCAATGTTTACGACCCTCTGCTTGACATCATCGTCAATTACCAAAAATATGGGTATAAAGTTGGAGACACTGGATGCTGTGGAACAGGGAGAATAGAGGTTGCAATATTATGCAACAGTTTCGATACGACATGTCCCAATGTTCAGGATTATGTGTTTTGGGACAGTTTTCATCCCACAGAAAGCGCTTACAAAAGACTCATAGCTCCTATTCTTCAAAAATATTTGTACCAATTCAAGTGA 1095 0.4311 MVLSSSSSFSQSLPSNMLCFALLVLSVSLKTKALLKLPPNVSVPAVFVFGDSVVDTGNNNNRTTSFARSNFAPYGRDFEGGVPTGRFSNGKVPSDLIVEELGIKELLPAYLKPNLEGSDLVTGVCFASGGSGYDPLTSILEGSMALSGQLDLFKEYTVKLKGLVGDERAKFIIANSLFIVVAGSSDISNTYRTRSLLYDPPSYSDLLLNSASTFLTELNELGARRIAVFSAPPIGCLPFQRTVGGGIEKKCAPRPNNLAQLFNTKLSNLVGSLNRNFPSSRNVFINVYDPLLDIIVNYQKYGYKVGDTGCCGTGRIEVAILCNSFDTTCPNVQDYVFWDSFHPTESAYKRLIAPILQKYLYQFK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00080 364 CDD SGNH_plant_lipase_like 44 359 IPR035669 -
Viun8g00080 364 Gene3D SGNH hydrolase 37 360 IPR036514 -
Viun8g00080 364 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 46 57 IPR008265 GO:0006629|GO:0016298
Viun8g00080 364 PANTHER GDSL ESTERASE/LIPASE EXL3 24 353 - -
Viun8g00080 364 FunFam GDSL esterase/lipase APG 35 360 - -
Viun8g00080 364 Pfam GDSL-like Lipase/Acylhydrolase 46 351 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00080 Viun-Chr8 394012 399240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00080 40 357 Pollen Coat Proteome AT1G75910 40.798 2.33e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00080 - - gmx:102668807 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03693 9 42158263 42161675 Viun8g00080 8 394012 399240 PCT