Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00079 ATGTTGCTTTTTATGAAGCTCTCTCCTTCTTCTTCTTCTTGTTCTCCATGTTCACTCTTCCGTTTCATATTACTATTTACAATAACAGTTTTGATTGTGTGCGGAAAAACAAGGGCAGTTGTGAAACTGCCACCAAATGTTTCAGTTCCTGCAGTGTTGGTGTTTGGAGATTCGATCATGGACACTGGCAACAACAACAACAATTTAGCAACAACAGCAAGGTGCAATTACCCTCCATATGGAAAAGATTTTAAGGGAGGGATCCCTACAGGAAGATTCAGTAATGGAAAGGTTCCATCTGACCTTATAGTGGAGGAACTGGGAATAAAGGAGTTTCTTCCACCATTCGTGGATTCAAATCTTGAAGCTGGTGAATTGGCGACCGGTGTGTGCTTTGCATCTGGTGGCGCAGGATACGATCCTTTAACAGCACAATCATCGTTGACTATATCATTATCGGGTCAACTAGATTTGTTCAGAGAATACGTAGGGAAGTTGAAAGGGGTGGTCGGAGAAGAGAGGAGCAAGTTCATCTTGAAAAACACTCTTTATATTGTGGTATTAGGAAGCAACGACATTTCCAACACATACTTTTTGACCCGTGTTCGACAACTGCAATACCCTGATTTTTCTGCTTATGCTGATTTCATGCTCTCCTCAGCTTCTATTTTCTTGAAGGAAATATACGGAGAAGGGGCACGGAGGATTGCAGTGTTCAGTGTGCCACCACTTGGGTATTTGCCATCTCAGAGAACAATCGGAGGAGGAATACAAAGAAACGTTGTAGTGAAGATAAACGACGCCGTACGGATCTTTAACGCCAAATTGTCAAAGCAACTTGACTCTCTGAATCAAAACTTTCAAGATAGCAAAATAGTGTACATTGATGTTTACAACCCTCTACTTGACATCATAGTGAACTACCAAAAATATGGGTATAAAGTGGGAGACAGAGGGTGCTGTGGCACAGGCACAATAGAAGTTGTATTACTGTGCAATCGTTTCACTCCATTGTGCCCTAACGATTTGGAGTATGTGTTTTGGGACAGTTTTCACCCAACCGAAAGTGTTTATAAAAAACTTATAAGCCCTGTTATTGCAAAATATTTGAACAAGTTCTTGTGA 1125 0.4107 MLLFMKLSPSSSSCSPCSLFRFILLFTITVLIVCGKTRAVVKLPPNVSVPAVLVFGDSIMDTGNNNNNLATTARCNYPPYGKDFKGGIPTGRFSNGKVPSDLIVEELGIKEFLPPFVDSNLEAGELATGVCFASGGAGYDPLTAQSSLTISLSGQLDLFREYVGKLKGVVGEERSKFILKNTLYIVVLGSNDISNTYFLTRVRQLQYPDFSAYADFMLSSASIFLKEIYGEGARRIAVFSVPPLGYLPSQRTIGGGIQRNVVVKINDAVRIFNAKLSKQLDSLNQNFQDSKIVYIDVYNPLLDIIVNYQKYGYKVGDRGCCGTGTIEVVLLCNRFTPLCPNDLEYVFWDSFHPTESVYKKLISPVIAKYLNKFL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00079 374 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 52 63 IPR008265 GO:0006629|GO:0016298
Viun8g00079 374 CDD SGNH_plant_lipase_like 50 370 IPR035669 -
Viun8g00079 374 Gene3D SGNH hydrolase 42 372 IPR036514 -
Viun8g00079 374 FunFam GDSL esterase/lipase APG 41 370 - -
Viun8g00079 374 Pfam GDSL-like Lipase/Acylhydrolase 52 363 IPR001087 GO:0016788
Viun8g00079 374 PANTHER GDSL ESTERASE/LIPASE EXL3 26 364 - -
Viun8g00079 374 SUPERFAMILY SGNH hydrolase 50 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00079 Viun-Chr8 384917 388281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00079 46 371 Pollen Coat Proteome AT1G75910 38.415 6.03e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00079 - - gmx:100776651 581.252