Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00078 ATGAAGATCCCTTCTTCTTCTTCTTCTTCTTTGCATTATTTTCTGGCTTCAACCTTCAATTCACTTCTCATTTTCTTCCTAGTTGTTTTCTGCAAAACATACGAGTCTGCAAAACTTGTAGCGAATGGTTCAGTTCCTGCAGTATTGGTGTTTGGAGATTCGATCATGGACACTGGCAACAACAACAAGATTTTGGCAACATCAGCAAGGTGCAATTTTCCACCATATGGCAAAGATTTTAAGGGAGGGATCCCTACTGGTAGATTTTGCAATGGAAAGGTTCCATCAGACTTCATAGCCGAAGAATTGGGCGTAAAAGAGTTTCTTCCAGCATACTTGGATCCAAATCTCCAACCTGATGAATTGGCCACTGGTGTTTGCTTTGCATCTGGTGGTGCTGGATACGATCCTTTAACATCAAAAACTGCAGGAGCTATATCACTATCTGGTCAACTACAAATGTTCAAAGAATACATAGTGAAGCTAAAACAACACGTTGGAGAGAACAGAACAAACTTCATCCTAAGCAACGCTCTTTTCTTCATCGTTTTAGGCACCAACGACATTTCCAACACCTACTTTCTGTCCCATCTCAGACAACTGCAATACGATGTTTCTGCTTACTCTGACTTCCTTGTTAACTCAGCTTCTACTTTCTTCAAGGAAATATATGAACTGGGTGCACGAAAGATTGGGGTATTCGCTGGGCCACCGGTTGGGTGTGTGCCATATCACAGAACACTGTCTGGTGGAATAGAAAGAAAGTGTATACAAAAGTACAACAATGCAGTGATGTTATTTAACGATAAACTGTTGAGGGAGATAGGTTTCCTTAATCAGAAACTTCCAAACAGTAGGATTGTTTACATCGATGTCTACAACCCTTTACTTGATATCATTGTGAACCACCAAAAATATGGGTACGAAGTCGGAGACAGAGGGTGTTGTGGCACAGGGACTCTAGAAGTTGCATTGACATGCAACCATTTGGATGCCACGTGTCCTAATGTTTTGGAATATGTGTTTTGGGACGGTTTTCACCCTACTGAAGACGTTTACAAAAAGCTTGTGCCCAATATTCTGCAGAAATATATACACCAGTTTCAGTGA 1110 0.4099 MKIPSSSSSSLHYFLASTFNSLLIFFLVVFCKTYESAKLVANGSVPAVLVFGDSIMDTGNNNKILATSARCNFPPYGKDFKGGIPTGRFCNGKVPSDFIAEELGVKEFLPAYLDPNLQPDELATGVCFASGGAGYDPLTSKTAGAISLSGQLQMFKEYIVKLKQHVGENRTNFILSNALFFIVLGTNDISNTYFLSHLRQLQYDVSAYSDFLVNSASTFFKEIYELGARKIGVFAGPPVGCVPYHRTLSGGIERKCIQKYNNAVMLFNDKLLREIGFLNQKLPNSRIVYIDVYNPLLDIIVNHQKYGYEVGDRGCCGTGTLEVALTCNHLDATCPNVLEYVFWDGFHPTEDVYKKLVPNILQKYIHQFQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00078 369 CDD SGNH_plant_lipase_like 46 364 IPR035669 -
Viun8g00078 369 PANTHER GDSL ESTERASE/LIPASE EXL3 27 358 - -
Viun8g00078 369 Pfam GDSL-like Lipase/Acylhydrolase 48 356 IPR001087 GO:0016788
Viun8g00078 369 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 48 59 IPR008265 GO:0006629|GO:0016298
Viun8g00078 369 FunFam GDSL esterase/lipase APG 37 365 - -
Viun8g00078 369 Gene3D SGNH hydrolase 33 365 IPR036514 -
Viun8g00078 369 SUPERFAMILY SGNH hydrolase 48 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00078 Viun-Chr8 378506 381611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00078 21 362 Pollen Coat Proteome AT1G75910 40.341 2.26e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00078 - - gmx:100777186 590.112