Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00077 ATGGGTTTCATGCAGCTTACCTCATTGCTCCGTTTCATAGTAATATTTGGTTTATGGTGCAGAACGAAGGGTGTGGTGAAGCTGCCACCACACGTGTCAGTTCCAGCAGTGTTAGCATTCGGAGATTCCATCGTTGATTCCGGCAACAACAACAACATTAAAACACTGGTCAAGTGTAACTTCCCACCTTACGGGAAAGATTTTCAGGGAGGAAAACCAACCGGTCGATTTTGCAACGGAAAAATCCCTTCCGACATAATAGTTGAAGAGTTGGGTATTAAGGAGTATTTGCCTGCATATTTGGATCCAAATCTGAAATCCAGTGATCTTGTTACTGGCGTCTGCTTTGCCTCCGGCGCTTCAGGATACGATCCTTTGACACCCCAAATAGCGTCGGTTATATCATTATCTACTCAACTAGACATGTTCAAGGAATACATAGGAAAGCTGAAACGCATTGTCGGAGAGAGCAGAACAAACTTCATCCTGGCCAACAGTCTTTGCCTTGTGGTGGCAGGCAGTGACGACATTGCCAACACCTATTTTGTTGCTCACGCCAGAATATTGCAGTATGACATTCCTTCTTACACTGATCTTATGGTCAACTCAGCCTCTGATTTTGTAAAGGATATATATAATCTGGGAGCTCGTAGAATTGCAGTGCTGAGTGCACCACCTATTGGGTGTGTGCCATCACAGAGAACTCTAGCTGGAGGATTAGAAAGAGGGTGCTCAGAAAAGTACAATAATGCAGCAAAGTTGTTCAATTCAAAACTCTCAAAGGAGCTTGATTCCCTTCGCAGCTACCCCAATAGCAGCATTGTTTACATTGATGTTTACAACCCTCTGTTTGATATCATTCAAAACTACCAAAAATATGGGTATAAAGTTATGGACAGAGGTTGCTGTGGCACAGGGAAACTAGAGGTTGCAGTGTTATGCAATCCTTTGGATTCTACTTGTTCTAATGCTTCAGAATATGTCTTTTGGGACAGTTACCATCCAACAGAAGGCGTTTACAGAAGAATAGTGAATCATGTTCTTGAAAAGTACATGAATCAATTGTTTTGA 1071 0.4239 MGFMQLTSLLRFIVIFGLWCRTKGVVKLPPHVSVPAVLAFGDSIVDSGNNNNIKTLVKCNFPPYGKDFQGGKPTGRFCNGKIPSDIIVEELGIKEYLPAYLDPNLKSSDLVTGVCFASGASGYDPLTPQIASVISLSTQLDMFKEYIGKLKRIVGESRTNFILANSLCLVVAGSDDIANTYFVAHARILQYDIPSYTDLMVNSASDFVKDIYNLGARRIAVLSAPPIGCVPSQRTLAGGLERGCSEKYNNAAKLFNSKLSKELDSLRSYPNSSIVYIDVYNPLFDIIQNYQKYGYKVMDRGCCGTGKLEVAVLCNPLDSTCSNASEYVFWDSYHPTEGVYRRIVNHVLEKYMNQLF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00077 356 Gene3D SGNH hydrolase 29 353 IPR036514 -
Viun8g00077 356 Pfam GDSL-like Lipase/Acylhydrolase 37 346 IPR001087 GO:0016788
Viun8g00077 356 CDD SGNH_plant_lipase_like 35 351 IPR035669 -
Viun8g00077 356 PANTHER GDSL ESTERASE/LIPASE EXL3 16 347 - -
Viun8g00077 356 FunFam GDSL esterase/lipase APG 26 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00077 Viun-Chr8 373539 375325 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00077 33 355 Pollen Coat Proteome AT1G75910 40.061 2.60e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00077 - - gmx:100777710 620.542