Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00073 ATGGCTGCAACAACACCGAATCACACAGTAACAGTATCTGGTTGGGCAGCACATGATACTTCGGGGAAGATTAGCCCCTACACCTTCAAAAGAAGGGAGAACGGTGTAAACGATGTAACCATAAAGATCTTGTACTGTGGGATCTGCCACACCGACCTCCACTATGCTAAAGATGAATGGGGCATCACCAAGTACCCTGTGGTGCCTGGGCACGAAATCATTGGGGTGGTAACTAAGACAGGAAGCGATGTGAAGGGGTTCAAGGAAGGAGACAGAGTGGGTGTGGGGTGTATGGCAGCTTCATGTTTGGAATGCGAACACTGCAAGACAGATCAGGAAAACTACTGTGATAAGATGGTGCTTATATACAACGGAGTCTTCTGGGATGGCAGCATAACCTACGGTGGCTACTCCAAACTCATTATTGCAGACTACAGGTATGTGGTACACATTCCGGAGAGCCTACCGATGGATGCGGCGGCTCCTCTACTGTGCGCCGGAATAACAGTGTTCACTCCGTTGAAAGACCACGATTTGGTGGCGACGCCGGGGAAAAAGATTGGGGTGGTTGGGTTGGGAGGGCTGGGACACTTGGCCGTTAAATTCGGAAAGGCGTTTGGGCACCATGTTACTGTCATCAGCACTTCTCCTTCCAAAGAAGCCGAAGCGAAGCAACGTTTGGGTGCTGATGATTTCATAATCAGCTCCAACCCTAAGCAATTACAGGATGCAAAGAGAAGCCTTGATTTCATATTGGACACTGTTTCTGGTGACCACCCTCTGTTACCCATCTTGGAATTGCTGAAAGTGAACGGAACCTTATTTCTGGTGGGAGCACCCGACAAGCCCCTCCAATTGCCGGCTTTCCCATTGATTTTTGGAAAGAGAGCGGTAAAAGGTGGCATCATAGGGGGAATAAAAGAGACACAGGAAATGTTGGATCTGTGTGCGAAGTACAACATAACGAGTGACATTGAGGTAATAACACCAGACAAGATCAACGAGGCTATCGATCGTCTTGCGAGGAATGATGTTCGGTACCGTTTCGTGATTGACATTGGTGCTGCCTCCAGCGAGTAG 1080 0.4889 MAATTPNHTVTVSGWAAHDTSGKISPYTFKRRENGVNDVTIKILYCGICHTDLHYAKDEWGITKYPVVPGHEIIGVVTKTGSDVKGFKEGDRVGVGCMAASCLECEHCKTDQENYCDKMVLIYNGVFWDGSITYGGYSKLIIADYRYVVHIPESLPMDAAAPLLCAGITVFTPLKDHDLVATPGKKIGVVGLGGLGHLAVKFGKAFGHHVTVISTSPSKEAEAKQRLGADDFIISSNPKQLQDAKRSLDFILDTVSGDHPLLPILELLKVNGTLFLVGAPDKPLQLPAFPLIFGKRAVKGGIIGGIKETQEMLDLCAKYNITSDIEVITPDKINEAIDRLARNDVRYRFVIDIGAASSE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00073 359 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Viun8g00073 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Viun8g00073 359 PANTHER ALDEHYDE REDUCTASE 7 354 IPR047109 GO:0016616
Viun8g00073 359 CDD CAD1 14 352 IPR047109 GO:0016616
Viun8g00073 359 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Viun8g00073 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Viun8g00073 359 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Viun8g00073 359 FunFam probable cinnamyl alcohol dehydrogenase 15 173 - -
Viun8g00073 359 Gene3D - 15 353 - -
Viun8g00073 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Viun8g00073 359 SUPERFAMILY GroES-like 18 177 IPR011032 -
Viun8g00073 359 Gene3D - 166 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00073 Viun-Chr8 341095 342925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00073 14 356 Monolignol Biosynthesis Gene Families AT2G21730 57.267 2.55e-144 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00073 K00083 - gmx:100820588 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00073 8 341095 342925 Viun8g00073 8 341095 342925 ECH