Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00063 ATGGGAGTGGGATTCTCAAAGGTGTTAACACACACAACGGACGATGAAATTCCAATTTCTTCGACAGATTCTGCTCCTCAACTCACCTACAAACAACCTCGGAAAAACCTCCTTTTTCCACGTCCGCTTCTTCCTCCTGCCATGCCAACCCAATGTTCTTCACAAACAGAACCCGTTCTCGGGAAGCCTTACGTTAAAATAAAGCACATGTACGAGATGAAGAAAGAGCTGGGAAGAGGCAAGTTTGGCGTGACTTATCTGTGCGTAGAGAAAGCCACAGGAATTGCCTATGCATGCAAATCCATCGCAAAGAAGGGTCCACAAGAAGTTGAGAATGTTAGAAGAGAGGTTATGATTCTGCAGCATCTTTCAGGGCAACATAACATAGTGGAGTTCAAGGAAGCTTATGAGGACAGGGAGAAGGTGCATCTGGTGATGGAGTTGTGCAGTGGAGGTGAACTCTTTCACCGTGTTGTTACAAAGGGAAGACACTCGGAGCGTGAAGCAGCCACAGTGATGAGACAGATTGTGAAGGTGGTCCACGTGTGCCATTTCATGGGTGTGATGCATCGAGACCTCAAGCCAGAGAATTTCTTGTTCGCGACCAAGGACGAGGATGCCCCTTTGAAACTCACGGATTTTGGATCCTCTGTCTTCTTTCACACTGGTGAGGTGTATAAAGATATTGTTGGAAATGCATATTACGTGGCTCCAGAGGTTTTGAAACGGAATTACGGAAAGGAGATAGATGTTTGGAATGCAGGAGTCATTTTATACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGCTGAAACCGAGAAAGGCGTGTTTGTTGAAGTTTTGGGTGGTAAGTTAGATATGGATAGCGAGCCATGGCCTTCTACATCAGATGCTGCAAAAGATTTGATCAGAAAAATGCTTACTTATGACCCTAAGGAACGGATCACAGCTGCTGAGGCCCTTGAACATCCATGGTTGAAAGAAGGTGGTGAAGCATCAGAAAAGCATGAAGACAATGCTGTTTTAAATAGGATGGAACAATTCAAAGCAATGAACCAGATGAAGAAGCTTGCCATGAAGGTAATAGCAGAAAATCTTTCAGAGGAAGAAACAAAGGGCCTGAGACAAATGTTCAACAATATGGATACTGATAACAGTGGCACTATCACATTTGAAGAACTCAAATCTGGATTATCCCGATTGGGTTCCCTGCCTAGTGAATCTGAAATAAGGCAGCTATTGAATGCTGTAAGTTCAATCCACGATTGGTGA 1272 0.4426 MGVGFSKVLTHTTDDEIPISSTDSAPQLTYKQPRKNLLFPRPLLPPAMPTQCSSQTEPVLGKPYVKIKHMYEMKKELGRGKFGVTYLCVEKATGIAYACKSIAKKGPQEVENVRREVMILQHLSGQHNIVEFKEAYEDREKVHLVMELCSGGELFHRVVTKGRHSEREAATVMRQIVKVVHVCHFMGVMHRDLKPENFLFATKDEDAPLKLTDFGSSVFFHTGEVYKDIVGNAYYVAPEVLKRNYGKEIDVWNAGVILYILLSGVPPFWAETEKGVFVEVLGGKLDMDSEPWPSTSDAAKDLIRKMLTYDPKERITAAEALEHPWLKEGGEASEKHEDNAVLNRMEQFKAMNQMKKLAMKVIAENLSEEETKGLRQMFNNMDTDNSGTITFEELKSGLSRLGSLPSESEIRQLLNAVSSIHDW 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00063 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Viun8g00063 423 Pfam Protein kinase domain 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00063 423 SUPERFAMILY EF-hand 352 417 IPR011992 -
Viun8g00063 423 Gene3D Transferase(Phosphotransferase) domain 1 154 334 - -
Viun8g00063 423 SUPERFAMILY Protein kinase-like (PK-like) 56 340 IPR011009 -
Viun8g00063 423 Pfam EF hand 374 400 IPR002048 GO:0005509
Viun8g00063 423 ProSiteProfiles Protein kinase domain profile. 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00063 423 FunFam Calcium-dependent protein kinase 1 73 153 - -
Viun8g00063 423 PANTHER SERINE/THREONINE-PROTEIN KINASE 66 415 - -
Viun8g00063 423 SMART serkin_6 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00063 423 Gene3D - 335 422 - -
Viun8g00063 423 Gene3D Phosphorylase Kinase; domain 1 73 153 - -
Viun8g00063 423 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Viun8g00063 423 CDD STKc_CAMK 71 325 - -
Viun8g00063 423 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Viun8g00063 423 FunFam calcium-dependent protein kinase 1 154 333 - -
Viun8g00063 423 CDD EFh 374 417 IPR002048 GO:0005509
Viun8g00063 423 ProSitePatterns Protein kinases ATP-binding region signature. 77 105 IPR017441 GO:0005524
Viun8g00063 423 SMART efh_1 373 401 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00063 Viun-Chr8 292036 294365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00063 45 417 EF-hand Containing Proteins AT1G50700 65.426 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Viun8g00063 Pkinase 1.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00063 K13412 - gmx:100792610 679.478