Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00061 ATGGGAGTGGGATTCTCAAAGGTGTTAACACACACAACGGACGATGAAATTCCAATTTCTTCGACAGATTCTGCTCCTCAACTCACCTACAAACAACCTCGGAAAAACCTCCTTTTTCCACGTCCGCTTCTTCCTCCTGCCATGCCAACCCAATGTTCTTCACAAACAGAACCCGTTCTCGGGAAGCCTTACGTTAAAATAAAGCACATGTACGAGATGAAGAAAGAGCTGGGAAGAGGCAAGTTTGGCGTGACTTATCTGTGCGTAGAGAAAGCCACAGGAATTGCCTATGCATGCAAATCCATCGCAAAGAAGGGTCCACAAGAAGTTGAGAATGTTAGAAGAGAGGTTATGATTCTGCAGCATCTTTCAGGGCAACATAACATAGTGGAGTTCAAGGAAGCTTATGAGGACAGGGAGAAGGTGCATCTGGTGATGGAGTTGTGCAGTGGAGGTGAACTCTTTCACCGTGTTGTTACAAAGGGAAGACACTCGGAGCGTGAAGCAGCCACAGTGATGAGACAGATTGTGAAGGTGGTCCACGTGTGCCATTTCATGGGTGTGATGCATCGAGACCTCAAGCCAGAGAATTTCTTGTTCGCGACCAAGGACGAGGATGCCCCTTTGAAACTCACGGATTTTGGATCCTCTGTCTTCTTTCACACTGGTGAGGTGTATAAAGATATTGTTGGAAATGCATATTACGTGGCTCCAGAGGTTTTGAAACGGAATTACGGAAAGGAGATAGATGTTTGGAATGCAGGAGTCATTTTATACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGCTGAAACCGAGAAAGGCGTGTTTGTTGAAGTTTTGGGTGGTAAGTTAGATATGGATAGCGAGCCATGGCCTTCTACATCAGATGCTGCAAAAGATTTGATCAGAAAAATGCTTACTTATGACCCTAAGGAACGGATCACAGCTGCTGAGGCCCTTGAACATCCATGGTTGAAAGAAGGTGGTGAAGCATCAGAAAAGCATGAAGACAATGCTGTTTTAAATAGGATGGAACAATTCAAAGCAATGAACCAGATGAAGAAGCTTGCCATGAAGGTAATAGCAGAAAATCTTTCAGAGGAAGAAACAAAGGGCCTGAGACAAATGTTCAACAATATGGATACTGATAACAGTGGCACTATCACATTTGAAGAACTCAAATCTGGATTATCCCGATTGGGTTCCCTGCCTAGTGAATCTGAAATAAGGCAGCTATTGAATGCTATTGGTGATGGCAAAAGTGGAACAATTAACTACTGTCAATTCATTGCTGCAACCATGGATCCACACAAACTGGAGAAGGGGGGGAATTTGTTCAAGGCTTTTCAATACTTTGACAAGGATGACAAGGGTTATATAACAGGTGATGAACTTAGGGAAGCTATCACAGAACACCAAATGGGAGATGAAGCTGCGATAGATGGAGTATTTGAGGATGTAGATTCTGACAAAGATGGGAAAATTAGCTATGAGGAATTTATGAGCATGATGAGAAACAAATGCTGA 1530 0.4346 MGVGFSKVLTHTTDDEIPISSTDSAPQLTYKQPRKNLLFPRPLLPPAMPTQCSSQTEPVLGKPYVKIKHMYEMKKELGRGKFGVTYLCVEKATGIAYACKSIAKKGPQEVENVRREVMILQHLSGQHNIVEFKEAYEDREKVHLVMELCSGGELFHRVVTKGRHSEREAATVMRQIVKVVHVCHFMGVMHRDLKPENFLFATKDEDAPLKLTDFGSSVFFHTGEVYKDIVGNAYYVAPEVLKRNYGKEIDVWNAGVILYILLSGVPPFWAETEKGVFVEVLGGKLDMDSEPWPSTSDAAKDLIRKMLTYDPKERITAAEALEHPWLKEGGEASEKHEDNAVLNRMEQFKAMNQMKKLAMKVIAENLSEEETKGLRQMFNNMDTDNSGTITFEELKSGLSRLGSLPSESEIRQLLNAIGDGKSGTINYCQFIAATMDPHKLEKGGNLFKAFQYFDKDDKGYITGDELREAITEHQMGDEAAIDGVFEDVDSDKDGKISYEEFMSMMRNKC 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00061 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Viun8g00061 509 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Viun8g00061 509 Pfam Protein kinase domain 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00061 509 FunFam Calmodulin A 363 508 - -
Viun8g00061 509 ProSiteProfiles Protein kinase domain profile. 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00061 509 Gene3D Phosphorylase Kinase; domain 1 73 153 - -
Viun8g00061 509 Gene3D - 346 435 - -
Viun8g00061 509 Pfam EF-hand domain pair 446 506 IPR002048 GO:0005509
Viun8g00061 509 PANTHER SERINE/THREONINE-PROTEIN KINASE 66 501 - -
Viun8g00061 509 SMART serkin_6 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00061 509 ProSiteProfiles EF-hand calcium-binding domain profile. 441 475 IPR002048 GO:0005509
Viun8g00061 509 Gene3D - 352 505 - -
Viun8g00061 509 FunFam Calcium-dependent protein kinase 1 73 153 - -
Viun8g00061 509 CDD EFh 446 506 IPR002048 GO:0005509
Viun8g00061 509 SUPERFAMILY Protein kinase-like (PK-like) 56 340 IPR011009 -
Viun8g00061 509 ProSiteProfiles EF-hand calcium-binding domain profile. 476 509 IPR002048 GO:0005509
Viun8g00061 509 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Viun8g00061 509 CDD STKc_CAMK 71 325 - -
Viun8g00061 509 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Viun8g00061 509 SMART efh_1 480 508 IPR002048 GO:0005509
Viun8g00061 509 SMART efh_1 445 473 IPR002048 GO:0005509
Viun8g00061 509 SMART efh_1 373 401 IPR002048 GO:0005509
Viun8g00061 509 Pfam EF hand 374 400 IPR002048 GO:0005509
Viun8g00061 509 SUPERFAMILY EF-hand 365 505 IPR011992 -
Viun8g00061 509 Gene3D Transferase(Phosphotransferase) domain 1 154 345 - -
Viun8g00061 509 FunFam Calcium-dependent protein kinase 5 154 334 - -
Viun8g00061 509 ProSitePatterns Protein kinases ATP-binding region signature. 77 105 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00061 Viun-Chr8 291435 294365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00061 47 507 EF-hand Containing Proteins AT3G20410 61.207 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Viun8g00061 Pkinase 2.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00061 K13412 - gmx:100792610 811.601