Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00057 ATGGTAGGAAGGGTGCAAGAATGGCGATGCGTTTGGAATTGGATTCATCGCCGGAATTGGAGATGCAGTCAGCAGCGTCTCTTGCACGACGGCCCAGACACCGTAGAGGAGCTACTCGACAGGCACCTCGTCAAAACCAAAAACAAAAACGATAACGATCACGACGAGTTCGAGAATCGGAGGAAACTCACCAGCACTCGCCGCGAAGCGCTCAGTCTGTACCGTGACATTCTTCGGGCCACCCGATTCTTCGTGTGGCCCGATTCGAGAGGCGTCATCTGGCGCGACGTACTCAGACAAAATGCCCGAACGGAATTCGAACAGGCCCGCTTCGAAACCGACCCGGAAATCGTAACCCGTCTGCTTATCGGGGGACGCGAAGCCCTACACTCCGCTATCGACAAGCTCGCCGAGAAGCATAGACATCACATTCAGAAAGATAATCCCTCTGATTCCCATCCACGCTGA 468 0.5449 MVGRVQEWRCVWNWIHRRNWRCSQQRLLHDGPDTVEELLDRHLVKTKNKNDNDHDEFENRRKLTSTRREALSLYRDILRATRFFVWPDSRGVIWRDVLRQNARTEFEQARFETDPEIVTRLLIGGREALHSAIDKLAEKHRHHIQKDNPSDSHPR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00057 155 CDD Complex1_LYR_LYRM7 70 130 IPR045298 GO:0034551
Viun8g00057 155 Pfam Complex 1 protein (LYR family) 68 129 IPR008011 -
Viun8g00057 155 PANTHER COMPLEX 1 PROTEIN CONTAINING PROTEIN, EXPRESSED 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00057 Viun-Chr8 290638 293434 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00057 - - gmx:100781648 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00057 8 290638 293434 Viun8g00057 8 290638 293434 ECH