Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00049 ATGGCAGCGCCGACAGTGAAAGTGTACGGTCCACCCATGTCCACTGCCGTGTCCAGAGTCTTGGCCTGTCTGTTGGAGAAAGACGTTCCGTTCCAACTCATTCCCGTTAACATGTCCAAAGGGGAACACAGGACCCCTCACTTTCTCAAGCTTCACCCTTTCGGACAAGTACCTGCATTTCAAGACGCCGACGACATTTCCCTCTTCGAGTCCAGAGCGATATGCCGCTACGTATGCGAGAAATACGGCGACAGAGGGAACAAGGATCTCTACGGAAGCAACCCTCTGGCGAAGGCCTCCATAGATCAATGGGTGGAGGCAGAAGGTCAGAACTTCAACCCACCTTCTTCCACTCTGGTCTTCCAGCTGGCATTCGCGCCCAGAATGAAGATCAAGCAGGACGAGGGTGTGATCAAGCAGAGCAAAGAAAAGCTGGCGAAGGTGCTGGATGTGTACGAGAAGAGGCTCGGAGAGAACCGGTTCTTGGCGGGGGATGAGTTCTCCCTCGCCGATCTTTCACATCTCCCGAACACCCAGTACCTGCTCGCCGCCCCCGACGCTGCTCCTCTCTTCAGTTCTCCCAACGTCGCCAGGTGGTGGGACGAGATCTCCTCCCGCGACTCCTGGAAGAAAGTCGTGGACTTGCAGCGAGGTGCCTGA 660 0.5606 MAAPTVKVYGPPMSTAVSRVLACLLEKDVPFQLIPVNMSKGEHRTPHFLKLHPFGQVPAFQDADDISLFESRAICRYVCEKYGDRGNKDLYGSNPLAKASIDQWVEAEGQNFNPPSSTLVFQLAFAPRMKIKQDEGVIKQSKEKLAKVLDVYEKRLGENRFLAGDEFSLADLSHLPNTQYLLAAPDAAPLFSSPNVARWWDEISSRDSWKKVVDLQRGA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00049 219 SUPERFAMILY Thioredoxin-like 4 86 IPR036249 -
Viun8g00049 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Viun8g00049 219 CDD GST_N_Phi 5 81 - -
Viun8g00049 219 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 214 - -
Viun8g00049 219 SFLD Main (cytGST) 5 215 - -
Viun8g00049 219 CDD GST_C_Phi 96 213 IPR034347 -
Viun8g00049 219 FunFam Glutathione S-transferase F2 5 90 - -
Viun8g00049 219 Pfam Glutathione S-transferase, C-terminal domain 118 207 IPR004046 -
Viun8g00049 219 SFLD Main.5: Phi-like 5 215 - -
Viun8g00049 219 Pfam Glutathione S-transferase, N-terminal domain 5 78 IPR004045 -
Viun8g00049 219 SUPERFAMILY GST C-terminal domain-like 87 214 IPR036282 -
Viun8g00049 219 Gene3D - 93 213 - -
Viun8g00049 219 FunFam Glutathione S-transferase F2 92 213 - -
Viun8g00049 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 86 IPR004045 -
Viun8g00049 219 Gene3D Glutaredoxin 4 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00049 Viun-Chr8 262824 264186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00049 8 217 Glutathione S-transferase Gene Family AT2G47730 47.867 1.74e-65 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00049 K00799 - qsu:112008175 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00049 8 262824 264186 Viun8g00049 8 262824 264186 ECH