Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00047 ATGTTGTCATTTAGTCGCCACATTCTAAATCCTTGTACACAACATTCAAATCTCGCCTCCTTAAATTGGAGGACAACAACCTTAACCTTCCTCAAATCTCGTTCGTTTCCTATTCTTCTATCTTCTTCAATTGCCAACACCAAAACAATGGGTTCTCTTTCCGCTCTGCACCAACCAATCCAATATCCCGCTGCTCGCAGAGACGACTCCGTCGTTGACCACTTCCACGGGGTCAAGATTGCCGATCCTTACCGATGGCTGGAGAATCCGGAGGCGGAGGAAGTGAAAGAGTTCGTGCAGAAACAGGTGGCGTTGACGGATTCGGTGCTGCAGAGGTGCGAGTGCAGGGAGAAGCTGTCGGAGAAGATAACGGAGCTCTTTGATAATCCTCGTTACAACGCTCCATTCCGGCGTGGGAATAAGTACTTTTACTTCCACAACACGGGTCTTCAGGCGCAGAGCGTGCTTTACTTGCAGCACAGTTTAGAGGCTGAGGCTGAGGTTTTGCTCGATCCCAATGCGCTCAGTGAAGATGGAACTGTCTCCCTCAACACATTCTCCGTCAGCAAAGATGCTGAGTTCTTGGCCTATGGACTTAGTTCCAGTGGTAGCGACTGGGTCACGATAAAAGTCATGCGTATTCAGGACAGGAGTGTTCAGCCTGATACTTTATCCTGGGTCAAGTTTTCCTCCATTAGTTGGACGCACGATAGCAAAGGTTTCTTTTACAGCCGCTATCCAGCTCCAAAGGTTGGAGAAGTAGCAGATGCTGGGACTGAAACTAATTCGAACCTTCATCATGAACTCTGTTATCATTTTTTGGGTACTGATCAATCCGAAGACATTCTGTGTTGGAGAGATCCTGAGAATCCTAAATATATGTTTGGAGGAAGTGTTACCGAAGACGGGAAGTATGTTCTTCTCTATATTGATGAAGGGTGTGATCCAGTTAACAAGCTTTACTATTATGACCTGTCTGAACTTCCAAACGGGCTGGAAAGTTTTCGGAATGAAAATTCCCTCCTTCCATTTGTCAAGCTTGTTGATAAATTCGATGGACAATATCATGCCATTGTAAATGACGACACTTTATTTACATTTTTAACTAATAAAGATGCTCCAAAATACAAAGTAGTTCGAGTAGATTTGAAAGAACCAAATGCTTGGACTGATGTTATCGAAGAGTCTGAAAAAGATGTGCTTGAGTCAGCACGTGCTGTAAATGGTAACCAACTTATTGTGAGCTACTTGAGTGATGTGAAATATGTTCTGCAAGTCAGAGACTTGGAAACAGGTTCCTTGCAACATCAATTACCAATTGACATTGGCACAGTCAGTGAAATTTCTGGGCGGCGTGAGGATTCCGAGGTTTTCATTGGTTTTACAAGTTTTTTGACTCCTGGAATCATATATCAGTGCGACCTGAGAACACAAGTTCCTGATATGAAGATATTTCGTGAGATTGTTGTCCCTGGGTTTGACCGCTCCGAGTTTCATGTCAATCAGGTTTTTGTGCCTAGTAAAGACGGTACCAAGGTTCCGATGTTTATTGTTGGCAGAAAGGATATTGTTTTGGATGGTTCACACCCTTGTCTGCTATATGGATACGGTGGCTTTAACGTCAGTCTTACACCATATTTCAGCATCAGTCGTACTGTACTGGCGAGACATTTAGGCGTTGTTTTCTGCATAGCAAATATTCGTGGTGGTGGAGAATATGGAGAGGATTGGCACAAAGCTGGCTCCCTTGCCAACAAGCAAAACTGCTTTGATGACTTCATTGCAGCAGCCGAATACCTTGTATCTTCTGGTTACACCCAACCCAAAAAGTTATGTATCGAGGGTGGAAGCAATGGTGGACTTCTTGTTGGTGCTTGCATAAATCAAAGACCTGATCTCTTTGGTTGTGCGCTGGCTCATGTTGGTGTTATGGACATGCTACGGTTTCACAAATTTACAATAGGTCATGCTTGGACCACAGATTATGGTTGTTCAGACAAGGAGGAAGAATTTCATTGGCTAATCAAGTACTCACCATTGCATAACGTCCAGAGACCTTGGGAAAAGCATCCTAATCAGTCAATTCAGTACCCATCAACAATGCTGTTGACTGCTGATCATGATGATCGTGTTGTGCCATTGCATTCATTAAAGCTATTGGCAACCTTGCAGTATGTCCTCGTTACTAGTGTTGATAAAAGTCCCCAGACAAACCCTATAATTGGTCGCATTGAGTGCAAGGCTGGGCATGGTGCAGGGCGTCCTACAAAGAAAATGATAGATGAAGCTGCTGACCGGTACAGTTTCATGGCCAAAATGTTAGATGCACATTGGATTGAGTAG 2343 0.44 MLSFSRHILNPCTQHSNLASLNWRTTTLTFLKSRSFPILLSSSIANTKTMGSLSALHQPIQYPAARRDDSVVDHFHGVKIADPYRWLENPEAEEVKEFVQKQVALTDSVLQRCECREKLSEKITELFDNPRYNAPFRRGNKYFYFHNTGLQAQSVLYLQHSLEAEAEVLLDPNALSEDGTVSLNTFSVSKDAEFLAYGLSSSGSDWVTIKVMRIQDRSVQPDTLSWVKFSSISWTHDSKGFFYSRYPAPKVGEVADAGTETNSNLHHELCYHFLGTDQSEDILCWRDPENPKYMFGGSVTEDGKYVLLYIDEGCDPVNKLYYYDLSELPNGLESFRNENSLLPFVKLVDKFDGQYHAIVNDDTLFTFLTNKDAPKYKVVRVDLKEPNAWTDVIEESEKDVLESARAVNGNQLIVSYLSDVKYVLQVRDLETGSLQHQLPIDIGTVSEISGRREDSEVFIGFTSFLTPGIIYQCDLRTQVPDMKIFREIVVPGFDRSEFHVNQVFVPSKDGTKVPMFIVGRKDIVLDGSHPCLLYGYGGFNVSLTPYFSISRTVLARHLGVVFCIANIRGGGEYGEDWHKAGSLANKQNCFDDFIAAAEYLVSSGYTQPKKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTTDYGCSDKEEEFHWLIKYSPLHNVQRPWEKHPNQSIQYPSTMLLTADHDDRVVPLHSLKLLATLQYVLVTSVDKSPQTNPIIGRIECKAGHGAGRPTKKMIDEAADRYSFMAKMLDAHWIE 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00047 780 Gene3D alpha/beta hydrolase 71 770 IPR029058 -
Viun8g00047 780 SUPERFAMILY Peptidase/esterase 'gauge' domain 58 478 - -
Viun8g00047 780 ProSitePatterns Prolyl endopeptidase family serine active site. 592 622 IPR002471 GO:0004252|GO:0006508
Viun8g00047 780 Gene3D - 130 489 - -
Viun8g00047 780 Pfam Prolyl oligopeptidase family 546 775 IPR001375 GO:0006508|GO:0008236
Viun8g00047 780 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 615 635 IPR002470 GO:0004252|GO:0006508
Viun8g00047 780 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 557 581 IPR002470 GO:0004252|GO:0006508
Viun8g00047 780 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 697 719 IPR002470 GO:0004252|GO:0006508
Viun8g00047 780 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 530 548 IPR002470 GO:0004252|GO:0006508
Viun8g00047 780 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 585 604 IPR002470 GO:0004252|GO:0006508
Viun8g00047 780 FunFam Prolyl endopeptidase 451 770 - -
Viun8g00047 780 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 63 478 IPR023302 GO:0004252
Viun8g00047 780 SUPERFAMILY alpha/beta-Hydrolases 500 725 IPR029058 -
Viun8g00047 780 FunFam Prolyl endopeptidase 130 489 - -
Viun8g00047 780 PANTHER PROLYL ENDOPEPTIDASE 55 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00047 Viun-Chr8 236933 241124 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00047 K01322 - gmx:100812955 1404.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00047 8 236933 241124 Viun8g00047 8 236933 241124 ECH
Viun8g00047 8 236933 241124 Viun9g03725 9 42363518 42369775 PCT