Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00044 ATGATGTCGCTCAACATGGCGGTTGTGCTGTGTTTTTCTCTGTTTGCCATGGTTGCTGTCGCTGAAGATCCGTACAGGTTCTTCAACTGGAATGTTACTTACGGAGACATTTATCCACTTGGTGTTCGCCAACAGGGAATACTTATCAACGGTCAATTCCCAGGTCCAGACATTCATTCTGTTACCAACGACAACCTCATCATCAATGTCTTCAACAGTTTGGACCAACCCTTTCTCCTATCCTGGAACGGTGTGCAGCAGAGGAGGAACTCCTTCGAAGACGGGGTTTCGGGAACAACGTGTCCGATTCCACCGGGAGGGAACTTCACATACATACTTCAGGTGAAGGATCAGATTGGAAGCTTCTACTATTTCCCATCTCTTGCATTCCACAAAGCCGCGGGTGGATTCGGAGGTATTAGGATTTTGAGCAGACCCAGAATTCCAGTCCCTTTCGACGATCCCGCCGGTGATTACACTGTCCTCATTGGAGATTGGTACAAGTTGAACCACACGGATTTGCGGGCTATTCTTGATGGAGGTAGCAAGCTGCCTTTCCCTGATGGAATCCTCATCAATGGTCGTGGCTCTAACGGAGCATCTTTCAATGTGGAACAAGGAAAAACGTACAGGCTGAGAATATCAAATGTGGGGTTGGAAAATTCCCTGAATTTCCGCATACAGAACCACAAATTAAAGCTGGTAGAAGTGGAAGGAACGCACACGGTTCAAACAACCTACTCATCTCTTGACGTGCACGTGGGCCAGTCTTACTCTGTTCTGGTCACTGCGGATCAACCCGCTCAGGACTATTACATCGTGGTTTCTTCTCGATTTACATCTACAGTTCTCACCTCCACTGCCATTCTTCGCTACAGCAACTCCGCAGGCCCAGTATCAGGCCCACCCCCTGGTGGACCTACCATTCAGATTGATTGGTCTCTCAACCAGGCCCGCTCCATCAGGACGAACCTGACAGCAAGTGGACCAAGGCCGAACCCGCAAGGATCGTACCACTACGGTCTGATAAACACGACGAGGACCATCATACTGTCGAGTTCAGCTGGTATAGTGAACGGCAAACAAAGATACGGAATCAACAGCGTCTCTTACCTTGCTCCAGACACTCCTCTTAAGCTCGCCGACTACTTCAAAATCTCAGGTGTTTTCCGTGTCGGAAGCATTTCTGACAGGCCCACTGGTGGTGGCATTTACCTTGACACATCTGTTTTGCAAACCGACTACAGAACATTTGTGGAGATTGTCATCCAAAACGACGAAGACGTCATTCAGAGCTATCATCTCGATGGCTACTCTTTCTTTGTGGTTGGTATGGACGGAGGACAGTGGACAGCTGCTAGCAGGAACCAGTACAATCTTCGCGATGCAGTTTCGCGGTCCACCACTCAGGTATATCCCAAGTCATGGACTGCTATCTATATTGCTCTTGACAATGTGGGAATGTGGAACTTGAGATCTGAATTTTGGGCACGGCAATACCTTGGTCAACAGTTTTACATGCGCGTTTATACAACATCAACCTCAATCAGAGATGAATATCCTGTTCCCAAGAATGCACTGCTTTGTGGTAGAGCAAGTGGGAGACACACTCGACCCCTTTGA 1623 0.4837 MMSLNMAVVLCFSLFAMVAVAEDPYRFFNWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLLSWNGVQQRRNSFEDGVSGTTCPIPPGGNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFDDPAGDYTVLIGDWYKLNHTDLRAILDGGSKLPFPDGILINGRGSNGASFNVEQGKTYRLRISNVGLENSLNFRIQNHKLKLVEVEGTHTVQTTYSSLDVHVGQSYSVLVTADQPAQDYYIVVSSRFTSTVLTSTAILRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTRTIILSSSAGIVNGKQRYGINSVSYLAPDTPLKLADYFKISGVFRVGSISDRPTGGGIYLDTSVLQTDYRTFVEIVIQNDEDVIQSYHLDGYSFFVVGMDGGQWTAASRNQYNLRDAVSRSTTQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSIRDEYPVPKNALLCGRASGRHTRPL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00044 540 SUPERFAMILY Cupredoxins 17 172 IPR008972 -
Viun8g00044 540 FunFam Monocopper oxidase-like protein 156 330 - -
Viun8g00044 540 Gene3D - 25 146 IPR008972 -
Viun8g00044 540 SUPERFAMILY Cupredoxins 152 332 IPR008972 -
Viun8g00044 540 SUPERFAMILY Cupredoxins 342 531 IPR008972 -
Viun8g00044 540 Gene3D - 341 536 IPR008972 -
Viun8g00044 540 Gene3D - 156 331 IPR008972 -
Viun8g00044 540 FunFam Monocopper oxidase-like protein 342 539 - -
Viun8g00044 540 FunFam L-ascorbate oxidase homolog 25 146 - -
Viun8g00044 540 CDD CuRO_2_AAO_like_1 157 292 IPR034271 -
Viun8g00044 540 CDD CuRO_3_AAO_like_1 374 494 IPR034275 GO:0005507
Viun8g00044 540 CDD CuRO_1_AAO_like_1 27 142 IPR034273 GO:0005507
Viun8g00044 540 PANTHER MULTI-COPPER OXIDASE 44 508 IPR045087 -
Viun8g00044 540 Pfam Multicopper oxidase 32 145 IPR011707 GO:0005507
Viun8g00044 540 Pfam Multicopper oxidase 376 512 IPR011706 GO:0005507|GO:0016491
Viun8g00044 540 Pfam Multicopper oxidase 158 294 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00044 Viun-Chr8 226721 231153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00044 - - gmx:100812416 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00044 8 226721 231153 Viun8g00044 8 226721 231153 ECH
Viun8g00044 8 226721 231153 Viun9g03728 9 42379688 42385864 PCT