Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00028 ATGGATCCCTACAAGAATTGCCCATCAAGCGCCTTCAATTCTCCCTTCTGGACCACTAATTCTGGTGCCCCCATCTGGAACAATAACTCCTCGCTCACGGTTGGATCAAGAGGTCCAATTCTTCTGGAGGATTATCATCTGGTGGAGAAGCTTGCAAACTTCGACAGGGAAAGGATCCCGGAGCGAGTGGTCCATGCCAGAGGAGCCAGCGCAAAGGGTTTCTTTGAAGTCACGCATGACGTCTCTCACCTCACCTGTGCTGACTTCCTTCGCGCCCCTGGAGTTCAGACTCCGCTCATCGTTCGCTTCTCCACCGTCATCCACGAGCGTGGCAGCCCTGAAACCCTGAGGGATCCCAGAGGATTTGCCGTCAAATTTTACACCAGAGAGGGTAACTTCGACCTCGTCGGAAACAACTTCCCCGTGTTTTTCGTCCGTGATGGCCTCAAGTTCCCCGACATGGTCCATGCCCTGAAACCCAATCCCAAGTCCCACATCCAGGAGAATTGGAGGATCCTCGATTTCTTCTCCTACGTTCCCGAAAGCCTTCACATGTTCTCCTTCTTATTCGACGACGTAGGTATCCCCCAGGATTACAGGCACATGGATGGTTTTGGTGTCAACACATACACCCTCATTAGCAAAACCGGCAAGGCTCACTATGTCAAATTCCATTGGAAAGCCACCTGTGGTGAAAAATGTCTCTTGGATGAGGAGGCCATCAGAGTTGGAGGATCCAACCATAGTCATGCCACCCAAGACCTTTACGATTCAATTGCTGCTGGAAACTATCCTGAGTGGAAACTTTATATCCAAACAATGGATCCTGAACACGAGGACAGATTTGATTTTGACCCACTTGATGTAACTAAGATCTGGCCTGAGGATGTTTTGCCCCTCCAGCCTGTTGGTCGCATGGTCTTGAATAAGAACATAGACAACTTCTTTGCCGAGAACGAACAACTTGCATTTTGCCCTGCCATTGTTGTACCTGGCATTTACTACTCCGATGACAAATTGCTTCAGACTCGGATATTCTCCTATGCCGATAGCCAGAGACACAGACTTGGTCCCAATTATCTGCAGATCCCTGCCAATGCACCCAAGTGTGCCCATCACAACAATCACCATGAAGGTTTCATGAATTTCATGCACAGGGATGAAGAGGTCAATTACTTCCCTTCAAGGTTTGATCCTGTTCGGCATGCAGAAAGGATTCCCATTCCTCATCGAATCCTAGATGGGAAGCGTGAAAAGTGTATGATTGAGAAGGAGAACAACTTTAAGCAACCTGGAGAGAGATACCGATCCTGGGCCCCTGACAGGCAAGAAAGATTTCTACGCCGATGGGTTGATGCTTTGTCTGAACCACGTGTGACCCATGAAATTCGCAGCATCTGGATATCATACTGGTCTCAGGCTGATCGTTCTCTCGGACAAAAGATAGCATCTCACCTGAATTTGAAGCCAAGCATCTAA 1479 0.4868 MDPYKNCPSSAFNSPFWTTNSGAPIWNNNSSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGLKFPDMVHALKPNPKSHIQENWRILDFFSYVPESLHMFSFLFDDVGIPQDYRHMDGFGVNTYTLISKTGKAHYVKFHWKATCGEKCLLDEEAIRVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTMDPEHEDRFDFDPLDVTKIWPEDVLPLQPVGRMVLNKNIDNFFAENEQLAFCPAIVVPGIYYSDDKLLQTRIFSYADSQRHRLGPNYLQIPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPVRHAERIPIPHRILDGKREKCMIEKENNFKQPGERYRSWAPDRQERFLRRWVDALSEPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00028 492 CDD catalase_clade_1 16 484 - -
Viun8g00028 492 PIRSF Catalase_clade1-3 8 491 IPR024711 GO:0004096|GO:0006979|GO:0020037
Viun8g00028 492 PRINTS Catalase signature 299 326 IPR018028 GO:0004096|GO:0006979|GO:0020037
Viun8g00028 492 PRINTS Catalase signature 331 357 IPR018028 GO:0004096|GO:0006979|GO:0020037
Viun8g00028 492 PRINTS Catalase signature 31 54 IPR018028 GO:0004096|GO:0006979|GO:0020037
Viun8g00028 492 PRINTS Catalase signature 115 132 IPR018028 GO:0004096|GO:0006979|GO:0020037
Viun8g00028 492 PRINTS Catalase signature 134 152 IPR018028 GO:0004096|GO:0006979|GO:0020037
Viun8g00028 492 PRINTS Catalase signature 94 112 IPR018028 GO:0004096|GO:0006979|GO:0020037
Viun8g00028 492 ProSiteProfiles catalase family profile. 14 492 IPR018028 GO:0004096|GO:0006979|GO:0020037
Viun8g00028 492 Pfam Catalase 18 398 IPR011614 GO:0004096|GO:0020037
Viun8g00028 492 ProSitePatterns Catalase proximal heme-ligand signature. 344 352 IPR002226 GO:0020037
Viun8g00028 492 ProSitePatterns Catalase proximal active site signature. 54 70 IPR024708 GO:0004096
Viun8g00028 492 SMART Catalase_2 18 401 IPR011614 GO:0004096|GO:0020037
Viun8g00028 492 Gene3D Catalase core domain 16 491 - -
Viun8g00028 492 PANTHER CATALASE 7 487 IPR018028 GO:0004096|GO:0006979|GO:0020037
Viun8g00028 492 SUPERFAMILY Heme-dependent catalase-like 13 489 IPR020835 GO:0020037
Viun8g00028 492 FunFam Catalase 14 492 - -
Viun8g00028 492 Pfam Catalase-related immune-responsive 423 486 IPR010582 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00028 Viun-Chr8 169039 171542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00028 K03781 - gmx:100037447 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00028 8 169039 171542 Viun8g00028 8 169039 171542 ECH