Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00022 ATGAGGAGCGGAGAGGAGAGACAGACAGTGACGGGGATTCGGAAGAAGGGAAGCGGAATCAGGCAATGGCTACTGCTCGACGGGAAAGGAGAGACGGAGGTGGTGGAGGCCGGGAAGCACGCCATCATGAGGCGCACCGGCCTCCCCGCCCGTGACCTCCGCATATTGGACCCTCTCCTCTCCTACCCTTCCACCCTTCTTGGCCGTGAGAGGGCCATCGTCATCAACTTGGAGCACATCAAGGCCATCATCACCGCCCAAGAGGTTCTCCTCCTCAACTCACGTGACCCCTCCGTCACCCCCTTCGTCCACGAGCTCCAGGCCAGGATCCTCCGCCATCACCAGGCCTCCTCCTCCTCTTCCAAAAACCATGACCACCACACTAACTACGAGCCCGACCGCGACCACGACCCCGATGCCATTAAGATTCTCCCTTTCGAGTTCGTAGCCCTGGAGGCCTGCCTTGAATCCGCCTGTAGCGTATTGGAGAACGAAGCAAAGACGTTGGAGCAGGAGGCTCATCCGGCCTTGGACAAGCTCACATCCAAGATCAGTACTCTCAATTTGGAACGAGTTCGTCAAATTAAGAGCCGATTAGTCGCCATCACTGGTCGTGTTCAGAAGGTGAGGGATGAATTGGAGCACTTGCTGGACGACGATGATGATATGGCTGAGATGTATCTGACGGAAAAGTTAGCCGAACAGCAGATGGAAGAGAGCTCTTCCCCATCCTCCATACATGACCACCACGACGAGGATTTAGACGACAGGACCGTTCCAGAAATATCCTCTGAGGCTGGAGGACCCCCTGTGGGCTTCGAGGATCATCACAATGTCTACAATGTTCTTGGTAGGGACAACCATGGAACCCGTGGTAGCACCTACAGTGCCGTCACCAAGCAGCTTGATGTCGAGGAGCTTGAAATGCTTTTGGAGGCTTACTTTGTGCAGATCGATGGCACCTTGAACAAGCTCTCGACGCTGAGGGAATATGTTGATGACACGGAGGATTACATCAATATCATGCTGGATGACAAACAGAACCATCTCCTCAAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGGCTTTGTTGTTGTGGCCGGAGTTTTCGGCATGAATATTCACATTGAGCTATTTGATCCCGATAAAGCCGGGATGACAGAGTTCCTGTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCTTGTATGTAGTTGCCATTGCCTGGTGTAAGCACAAACGTTTGCTGGAGTAA 1269 0.5327 MRSGEERQTVTGIRKKGSGIRQWLLLDGKGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAQEVLLLNSRDPSVTPFVHELQARILRHHQASSSSSKNHDHHTNYEPDRDHDPDAIKILPFEFVALEACLESACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTEKLAEQQMEESSSPSSIHDHHDEDLDDRTVPEISSEAGGPPVGFEDHHNVYNVLGRDNHGTRGSTYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLKMGVMLTTATLVVSGFVVVAGVFGMNIHIELFDPDKAGMTEFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00022 422 Gene3D - 9 94 - -
Viun8g00022 422 FunFam Magnesium transporter MRS2-1 11 94 - -
Viun8g00022 422 MobiDBLite consensus disorder prediction 113 136 - -
Viun8g00022 422 MobiDBLite consensus disorder prediction 233 255 - -
Viun8g00022 422 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 9 421 IPR039204 -
Viun8g00022 422 Pfam CorA-like Mg2+ transporter protein 306 408 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Viun8g00022 422 CDD Mrs2_Mfm1p-like 23 420 IPR039204 -
Viun8g00022 422 Coils Coil 152 172 - -
Viun8g00022 422 Gene3D Magnesium transport protein CorA, transmembrane region 97 350 - -
Viun8g00022 422 MobiDBLite consensus disorder prediction 118 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00022 Viun-Chr8 126060 129660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00022 23 422 MRS2 Gene Family AT3G19640 65.068 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00022 - - gmx:100819578 612.453