Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04241 ATGGCTTTAGAGCAGGAATTGTCGCTGGGTCAGAATACGAATACGAGTAGGAATCCGAACCCAGTTGACGGCGTGGATGTTCGGGGGGAAGGTGGAGACGAGGGAGGGAAAGCGCCGAGACTGCCTCGGTGGACGAGGCAAGAAATTCTGGTTCTGATACAGGGAAAGAGAGACGCTGAGAACAAGTTCAGGAGGGGCCGCACGGCCGGATTGCCATTAGGGTCGGGTCAGGTGGAGCCCAAATGGGCATCGGTTTCTTCTTACTGCAGAAAGCATGGAGTCAACAGAGGTCCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAAGAATGGGAATCTCAGATAAGAGAGGAGTCGGATTCCTTTTGGGTCATGAGAAACGATTTAAGGAGAGACCGGAAATTGCCCGGATTTTTTGACAAGGAGGTCTATGATATTCTCGATTCAGGCTCCCAAGCTCCGGCGTTGGCTCTCGCTCTTTCATCGCCTCCTTCAATGACAGTAACTGTTTGCAAGGACATGCGCATGGACATGGACACCAAAAGAGGGTATACACCTGCCCCTTCCTCAGCCTCTGTCCCTGCTGAGCCTGAGGAGCCTCACCTCTACGATAGTAATCGGATCGCGCCTGTTGAGGATGGTTTGTTTTCAGATTTCGAACAAGATGAAGTCTCTGCCAGTCCTGATAAGAAGGACATTTTTCCGCCCTCCAACAGGGTCTTCCCTGCTCCCATTCCTATATCAGGTGTGACTAACGAGAAACAGTCTACTCCAAATCCAGAAATGGGTTCTACCTCTCAAGGAGAGCGGAAAAGGAAGCGATTAGCAACTGATGGGGGGGAGGAAACTTTGCAAATCCATTTAATTGATGTCTTAGAAAGAAATGGCAAGATGCTAAGTGCTCAACTTGAAGCGCAGAATATAAATTTCCAGTTGGATCGTGAGCAGCGAAAAATCCATGGTAGTAATTTGGTTGCTGTGCTTGATAAGCTTGCAGATGCTCTAGGGAGAATCGCTGATAAATTATAG 1050 0.4914 MALEQELSLGQNTNTSRNPNPVDGVDVRGEGGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLPLGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREESDSFWVMRNDLRRDRKLPGFFDKEVYDILDSGSQAPALALALSSPPSMTVTVCKDMRMDMDTKRGYTPAPSSASVPAEPEEPHLYDSNRIAPVEDGLFSDFEQDEVSASPDKKDIFPPSNRVFPAPIPISGVTNEKQSTPNPEMGSTSQGERKRKRLATDGGEETLQIHLIDVLERNGKMLSAQLEAQNINFQLDREQRKIHGSNLVAVLDKLADALGRIADKL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04241 349 ProSiteProfiles Myb-like domain profile. 43 109 IPR001005 -
Viun7g04241 349 MobiDBLite consensus disorder prediction 1 21 - -
Viun7g04241 349 MobiDBLite consensus disorder prediction 256 272 - -
Viun7g04241 349 MobiDBLite consensus disorder prediction 1 42 - -
Viun7g04241 349 Pfam Myb/SANT-like DNA-binding domain 43 132 IPR044822 -
Viun7g04241 349 MobiDBLite consensus disorder prediction 27 41 - -
Viun7g04241 349 Gene3D - 44 114 - -
Viun7g04241 349 MobiDBLite consensus disorder prediction 255 286 - -
Viun7g04241 349 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 12 349 - -
Viun7g04241 349 CDD GT1 42 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04241 Viun-Chr7 40814300 40819034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04241 22 117 Trihelix Transcription Factor Family AT1G76890 26.042 4.11e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun7g04241 Myb_DNA-bind_4 8.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04241 - - gmx:100779050 469.929