Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04237 ATGGGTTGCTTTTCTTGTTTCGATTCGAGGGAAGACGAGAAGCTGAATCCCAATCCTCACCAGGAAAACCATCATCATCTTCATCATCATCATCACGATCATGATCTTAATCCCCCTATCCCCTCTCGTATGTCCAGACTGCCCTCTGCGTCTGCTGGAGCAGACAAGCTACGCTCATCAAGCAATGGCAATGCTAATAATGGTGACTCCAAAAGGGAATTGGCTGCTCTCAAGGATGGACCTCCTGGACAAATTGCTGCACAAATTTTCACATTCCGTGAGCTGGCAGCCGCAACCAAAAATTTCAGACCCCAATCCTTTTTGGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGCCGCCTTGAAACCACTGGTCAGGCTGTGGCTGTTAAACAGTTAGACAGAAACGGTCTTCAGGGCAACCGGGAATTCCTCGTGGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAATCTTGTCAATCTCATTGGATACTGTGCGGACGGGGACCAACGCCTCTTGGTTTATGAGTTTATGCCATTGGGATCATTGGAAGACCACCTTCATGATCTTCCCCCGGATAAGGAACCATTGGATTGGAACACTAGGATGAAAATAGCTGCTGGGGCAGCAAAAGGATTGGAATACCTTCACGACAAAGCAAATCCTCCTGTCATTTATAGAGATTTCAAATCGTCTAATATATTACTTGACGAAGATTATCATCCAAAGCTTTCAGACTTTGGGCTTGCAAAGCTGGGTCCAGTTGGTGATAAATCACACGTCTCCACCCGTGTCATGGGAACTTATGGCTACTGTGCCCCAGAATATGCTATGACTGGACAGCTGACTGTGAAGTCTGATGTATATAGTTTTGGGGTAGTGTTCTTGGAGCTGATTACTGGGCGTAAAGCCATTGACAGCACTCGACCCCATGGAGAACAAAACCTTGTCACATGGGCACGTCCACTGTTCAATGACCGGAGAAAGTTTCCAAAGTTAGCAGATCCAGAGCTGCATGGACGGTATCCGATGCGGGGACTTTACCAAGCTCTTGCAGTGGCATCAATGTGCATTCAAGAACAGGCCGCAGCGCGTCCTCTGATTGGGGATGTGGTGACAGCCCTGTCTTTTCTAGCGAACCAGGCATATGACCATAAGGGAGGTGGTGATGATAAAAGGAACAGAGATGATCAGGGTGGAAGAATATTGAAAACTGAGCAAGGTGGAGGATCTGGAAGGAGATGGGATTTGGAAGGGTGTGAGAAAGATGAGTCCCCACGTGAAACTGCAAGGATGTTAAACAACAGGGATCTTGATAGAGAACGTGCGGTGGCTGAAGCAAAGATGTGGGGAGAGAATTGGAGAGAGAAAAGACGACAAAGTGCGCAGGGCAGTTTTGATGCTTCTAACGCCTAG 1419 0.4792 MGCFSCFDSREDEKLNPNPHQENHHHLHHHHHDHDLNPPIPSRMSRLPSASAGADKLRSSSNGNANNGDSKRELAALKDGPPGQIAAQIFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLETTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEDYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFPKLADPELHGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSFLANQAYDHKGGGDDKRNRDDQGGRILKTEQGGGSGRRWDLEGCEKDESPRETARMLNNRDLDRERAVAEAKMWGENWREKRRQSAQGSFDASNA 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04237 472 MobiDBLite consensus disorder prediction 384 472 - -
Viun7g04237 472 CDD STKc_IRAK 108 376 - -
Viun7g04237 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Viun7g04237 472 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Viun7g04237 472 Gene3D Phosphorylase Kinase; domain 1 87 178 - -
Viun7g04237 472 ProSiteProfiles Protein kinase domain profile. 102 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g04237 472 PANTHER OS07G0668900 PROTEIN 3 387 - -
Viun7g04237 472 MobiDBLite consensus disorder prediction 11 78 - -
Viun7g04237 472 FunFam Serine/threonine-protein kinase PBS1 75 178 - -
Viun7g04237 472 SUPERFAMILY Protein kinase-like (PK-like) 85 378 IPR011009 -
Viun7g04237 472 MobiDBLite consensus disorder prediction 386 403 - -
Viun7g04237 472 Pfam Protein kinase domain 105 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g04237 472 FunFam Serine/threonine-protein kinase PBS1 179 394 - -
Viun7g04237 472 MobiDBLite consensus disorder prediction 416 463 - -
Viun7g04237 472 MobiDBLite consensus disorder prediction 54 69 - -
Viun7g04237 472 Gene3D Transferase(Phosphotransferase) domain 1 179 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04237 Viun-Chr7 40774496 40779753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04237 1 460 Glycoside Hydrolase AT3G07070 56.034 5.18e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Viun7g04237 Pkinase 9.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04237 K13430 - gmx:100777987 808.905