Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04212 ATGAAACGTTCGCGCAGAGGCAATGCCGATGCCGAAGTGGATGCCGACGGCGAGGGAGGTGCCAACAATAAAGCGGCGAGCGAGCAGAACCCCGCCACTCGCAGGGTCATACGCTCCCAGTTCCTCAAACTCAAGACTCTCATCAGCGAGAAAAAAGATGATTTGATGAACACTGAGTCCGACAACTTCGACAACATTTTGGACGAGTTCGACAAGTTACACGACCAAGTTGAGAAGCCCAGAGAGCAGGTTGCAGATGCAGAGGCACTCTTGGATCTGACGCGCACTCTGTTAGGATCTGTTAGGACTTTGGCGAACGAGGGTGTCACTCCTTCACAATTTGTTTCCTCTTTGCTCATACGCTATGGCCAAGGTCAAGGCCAAGATTCAATCGATTGGCAGAAACTTGGCCTTGCGGTGTCCCCAATGTTCCTCTCCGTTCATGGCTCTTCTACCATGCTTGGACCTATGGACAACGAAATCAAGAAACGAAGAATCGGAGTGCGCAAACAACGTGATCCTCGCGCACTCGTAACTACTAGACCCGAACAGCTTGATGAGGCTGGTGCGGTGGGAAAAACTGATACTGACAAAAACATGGCAACGATGTTTGACATCTTGAGGAAGACAAAACGTGTCCGACTTGAAAATTTAATTATCAACAGAAAGTCTTTTTCTCAGACCGTGGAAAATTTATTTTCTCTGTCATTCCTTGTAAAAGATGGTCGTGCTGAGATCAGTCTCGATGAAAATCGTTGCCACTATGTTTCTCCTAAAAATGCCCCAGCTGCTAATTTAGTATCATCAAAAGAAGTTTCTTATGGTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGCTTATGAAAGATGTTGTGCCGGAAGGGGAAGAGTTGATGCCACATCGGGTTCAATGTGCTACCCTTGCTGACCCTCAGGAAAGGATGGGTGTGGACGATTCCCAACCTACTTTGGCTTTAACACCTATCAGGAAGCTATCGCGGAATCGAGGACTGGTTGTGCAGGAAGAAAGTGTTGTAGAAGAAACTCCTGAATGTGACGAAGAAAAGGCTTCCAGAGAAGGGGCTATTCGTAGGTGTAAGCGTAAACTTCATTGA 1119 0.4674 MKRSRRGNADAEVDADGEGGANNKAASEQNPATRRVIRSQFLKLKTLISEKKDDLMNTESDNFDNILDEFDKLHDQVEKPREQVADAEALLDLTRTLLGSVRTLANEGVTPSQFVSSLLIRYGQGQGQDSIDWQKLGLAVSPMFLSVHGSSTMLGPMDNEIKKRRIGVRKQRDPRALVTTRPEQLDEAGAVGKTDTDKNMATMFDILRKTKRVRLENLIINRKSFSQTVENLFSLSFLVKDGRAEISLDENRCHYVSPKNAPAANLVSSKEVSYGHFVFRYDYQDWKLMKDVVPEGEELMPHRVQCATLADPQERMGVDDSQPTLALTPIRKLSRNRGLVVQEESVVEETPECDEEKASREGAIRRCKRKLH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04212 372 Pfam Nse4 C-terminal 213 299 IPR014854 -
Viun7g04212 372 PANTHER UNCHARACTERIZED 3 356 IPR027786 GO:0005634|GO:0006281|GO:0030915
Viun7g04212 372 MobiDBLite consensus disorder prediction 1 34 - -
Viun7g04212 372 MobiDBLite consensus disorder prediction 348 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04212 Viun-Chr7 40558234 40560641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04212 34 371 Non-SMC Element family AT1G51130 52.571 2.31e-116 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04212 K22825 - gmx:100792117 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g04212 7 40558234 40560641 Viun7g04212 7 40558234 40560641 ECH