Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04211 ATGCCGATGCCGAAGTGGATGCCGACGGCGAGGGAGGTGCCAACAATAAAGCGGCGAGCGAGCAGAACCCCGCCACTCGCAGGGTCATACGCTCCCAGTTCCTCAAACTCAAGACTCTCATCAGCGGTAGAGAAAAAAGATGATTTGATGAACACTGAGTCCGACAACTTCGACAACATTTTGGACGAGTTCGACAAGTTACACGACCAAGTTGAGAAGCCCAGAGAGCAGGTTGCAGATGCAGAGGCACTCTTGGATCTGACGCGCACTCTGTTAGGATCTGTTAGGACTTTGGCGAACGAGGGTGTCACTCCTTCACAATTTGTTTCCTCTTTGCTCATACGCTATGGCCAAGGTCAAGGCCAAGATTCAATCGATTGGCAGAAACTTGGCCTTGCGGTGTCCCCAATGTTCCTCTCCGTTCATGGCTCTTCTACCATGCTTGGACCTATGGACAACGAAATCAAGAAACGAAGAATCGGAGTGCGCAAACAACGTGATCCTCGCGCACTCGTAACTACTAGACCCGAACAGCTTGATGAGGCTGGTGCGGTGGGAAAAACTGATACTGACAAAAACATGGCAACGATGTTTGACATCTTGAGGAAGACAAAACGTGTCCGACTTGAAAATTTAATTATCAACAGAAAGTCTTTTTCTCAGACCGTGGAAAATTTATTTTCTCTGTCATTCCTTGTAAAAGATGGTCGTGCTGAGATCAGTCTCGATGAAAATCGTTGCCACTATGTTTCTCCTAAAAATGCCCCAGCTGCTAATTTAGTATCATCAAAAGAAGTTTCTTATGGTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGCTTATGAAAGATGTTGTGCCGGAAGGGGAAGAGTTGATGCCACATCGGGTTCAATGTGCTACCCTTGCTGACCCTCAGGAAAGGATGGGTGTGGACGATTCCCAACCTACTTTGGCTTTAACACCTATCAGGAAGCTATCGCGGAATCGAGGACTGGTTGTGCAGGAAGAAAGTGTTGTAGAAGAAACTCCTGAATGTGACGAAGAAAAGGCTTCCAGAGAAGGGGCTATTCGTAGGTGTAAGCGTAAACTTCATTGA 1101 0.4659 MPMPKWMPTAREVPTIKRRASRTPPLAGSYAPSSSNSRLSSAVEKKDDLMNTESDNFDNILDEFDKLHDQVEKPREQVADAEALLDLTRTLLGSVRTLANEGVTPSQFVSSLLIRYGQGQGQDSIDWQKLGLAVSPMFLSVHGSSTMLGPMDNEIKKRRIGVRKQRDPRALVTTRPEQLDEAGAVGKTDTDKNMATMFDILRKTKRVRLENLIINRKSFSQTVENLFSLSFLVKDGRAEISLDENRCHYVSPKNAPAANLVSSKEVSYGHFVFRYDYQDWKLMKDVVPEGEELMPHRVQCATLADPQERMGVDDSQPTLALTPIRKLSRNRGLVVQEESVVEETPECDEEKASREGAIRRCKRKLH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04211 366 Pfam Nse4 C-terminal 207 293 IPR014854 -
Viun7g04211 366 MobiDBLite consensus disorder prediction 1 50 - -
Viun7g04211 366 MobiDBLite consensus disorder prediction 342 366 - -
Viun7g04211 366 PANTHER UNCHARACTERIZED 37 350 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04211 Viun-Chr7 40558234 40560642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04211 46 365 Non-SMC Element family AT1G51130 53.313 2.34e-110 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04211 K22825 - gmx:100792117 518.079