Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04197 ATGCCGAGCTTCAATTCACAACAGCCCAATTCCAATGCATGCTATACAGAGGGAAGCACGGTTGATTCTTTTCGTCTGTCTGACTTTGATCAATCAGTTGGATATCGCATAGAGGATGCTGTTGCCTTAAGTGGAAACTCAATTTTAGACTCACTTAAAGTAAGTAGCCAGACAATTTCTCGAGGTCCTATTCAACTTGGTTCCTTTGATAAGTTGCCAACTTCACTTGACAAAAGCATATTAACAAACCAAACAGAGCGGCAAAGCTTGCAATTCCAAAAGGTTCACACATCAAATTTAGTTACTGGTGATACAGAACACCAGGAAGAGTTTGCCATGGCTGATGCCAGTCCTAGAACTGATATTTCTACAGATGCTGACACTGACGATAAGAATCCACAGTTTGATAGAAGTCAGGCCCTTGCTGCTGTGGCTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAGGCTGCAAGAAAAAGCCGACTGAGAAAGAAAGCTTATGTTCAACAGCTGGAAAGTAGTCGTTTAAAGCTGACCCAACTGGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAGTCTTTATATCAAGTTCAGGTGATCAAGCGCATTCAATGAGTGGAAATGGGGCCATGGCATTTGATGCAGAGTATGCAAGGTGGCTGGAAGAGCAGAATCGACAAGTTAATGAGCTAAGAGCAGCTGTAAATTCTCACGCAGGTGATACAGAACTCTGCATGATTATCGATGGTGTAATGGCACATTATGATGAGATATTTAGGCTGAAGGCCAATGCAGCTAAGGCTGATGTCTTCCATTTGTTGTCTGGCATGTGGAAAACACCAGCCGAGAGGTGTTTCCTATGGCTTGGAGGTTTTCGGTCTTCTGAACTCCTCAAGCTGCTGGTAAATCAGTTAGAACCTCTAACAGAGCAGCAGTTAGTGGGTATCACAAACTTGCAGCAATCTTCCCAACAGGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAGCAATCCCTTTCTGAGACATTATCCACTGGATCACTTGGCTCCTCTGGTTCATCAGGGAATGTGGCCAATTACATGGGTCAAATGGCTATGGCCATGGGCAAATTAGGGACACTTGAGGGCTTCATTAAGCAGGCTGACAATCTGCGGCAGCAAACACTGCAACAGATTCATCGGATACTGACAACTCGGCAATCTGCACGAGCACTGCTGGCAATACATGACTACTTTTCTAGGCTGCGTGCTCTTAGCTCTCTTTGGCTTGCTCGCCCAAGAGACTGA 1335 0.4562 MPSFNSQQPNSNACYTEGSTVDSFRLSDFDQSVGYRIEDAVALSGNSILDSLKVSSQTISRGPIQLGSFDKLPTSLDKSILTNQTERQSLQFQKVHTSNLVTGDTEHQEEFAMADASPRTDISTDADTDDKNPQFDRSQALAAVASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGDQAHSMSGNGAMAFDAEYARWLEEQNRQVNELRAAVNSHAGDTELCMIIDGVMAHYDEIFRLKANAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLSETLSTGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIKQADNLRQQTLQQIHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04197 444 SUPERFAMILY Leucine zipper domain 159 202 IPR046347 GO:0003700|GO:0006355
Viun7g04197 444 CDD bZIP_HBP1b-like 159 211 - -
Viun7g04197 444 ProSiteProfiles DOG1 domain profile. 224 441 IPR025422 GO:0006351|GO:0043565
Viun7g04197 444 MobiDBLite consensus disorder prediction 102 161 - -
Viun7g04197 444 FunFam BZIP family transcription factor 158 207 - -
Viun7g04197 444 Coils Coil 178 205 - -
Viun7g04197 444 Pfam bZIP transcription factor 159 199 IPR004827 GO:0003700|GO:0006355
Viun7g04197 444 Coils Coil 235 255 - -
Viun7g04197 444 SMART brlzneu 155 218 IPR004827 GO:0003700|GO:0006355
Viun7g04197 444 Pfam Seed dormancy control 241 316 IPR025422 GO:0006351|GO:0043565
Viun7g04197 444 Gene3D - 158 207 - -
Viun7g04197 444 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 201 IPR004827 GO:0003700|GO:0006355
Viun7g04197 444 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 162 177 IPR004827 GO:0003700|GO:0006355
Viun7g04197 444 PANTHER TRANSCRIPTION FACTOR TGA9 95 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04197 Viun-Chr7 40519886 40527911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04197 113 444 bZIP Transcription Factor Family AT3G12250 80.723 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun7g04197 DOG1 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04197 K14431 - gmx:100816123 731.095