Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04185 ATGCGTCGGTGGCTTTGTTGCACTTGTCAGGTGGAGGAGTCTTACCCATCGAACGAGAATGAACACCTGAAGAGCCCAAGGAATTATGGAGACAGCAACCAAAAAGGCTCAAAGGTGTCAGCTCCTGTCAAGCCTGAAACACAAAAGGCACCACCGCCTATTGAAGCTCCAGCCCTATCTTTAGATGAGCTGAAGGAAAAGACTGACAACTTTGGTTCGAAGGCATTAATCGGTGAAGGATCGTATGGAAGGGTGTATTACGCAACCTTAAACAATGGAAAAGCAGTGGCTGTGAAAAAGCTTGATGTTTCATCTGAACCCGAATCAAATAACGAGTTTTTGACCCAGGTTTCCATGGTCTCAAGATTGAAGAATGATAATTTTGTTGAGTTGCACGGGTACTGTGTTGAAGGAAATCTCCGTGTGCTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCACGGTAGAAAGGGAGTTCAAGGTGCACAACCAGGGCCAACACTTGATTGGATCCAGCGAGTTAGAATCGCAGTTGATGCGGCCAGGGGATTGGAGTATTTACATGAGAAAGTTCAGCCACCAATTATACACAGGGATATCAGATCAAGTAATGTGCTAATCTTTGAAGACTACAAGGCTAAGATAGCTGACTTTAACCTCTCCAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCAACTCGTGTATTGGGAACTTTTGGTTATCATGCTCCAGAATATGCAATGACTGGGCAGTTGACTCAAAAAAGCGATGTCTATAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACTGGAAGAAAACCTGTTGACCACACCATGCCTCGAGGACAGCAGAGTCTTGTCACATGGGCTACTCCACGATTGAGTGAAGATAAAGTGAAACAGTGCGTTGACCCAAAACTGAAGGGAGAATACCCCCCTAAAGGAGTTGCTAAGCTTGCAGCTGTTGCAGCACTGTGCGTGCAGTATGAAGCTGAGTTTAGGCCGAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTGAAGACTCCTGCTCCTGCTCCAGAAAGTTAA 1089 0.4536 MRRWLCCTCQVEESYPSNENEHLKSPRNYGDSNQKGSKVSAPVKPETQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNNEFLTQVSMVSRLKNDNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTPAPAPES 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04185 362 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Viun7g04185 362 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Viun7g04185 362 MobiDBLite consensus disorder prediction 15 56 - -
Viun7g04185 362 PIRSF ILK 12 357 - -
Viun7g04185 362 Gene3D Transferase(Phosphotransferase) domain 1 149 357 - -
Viun7g04185 362 Pfam Protein tyrosine and serine/threonine kinase 76 349 IPR001245 GO:0004672|GO:0006468
Viun7g04185 362 SMART tyrkin_6 71 349 IPR020635 GO:0004713|GO:0006468
Viun7g04185 362 Gene3D Phosphorylase Kinase; domain 1 34 147 - -
Viun7g04185 362 FunFam PTI1-like tyrosine-protein kinase 3 149 359 - -
Viun7g04185 362 FunFam PTI1-like tyrosine-protein kinase 3 33 147 - -
Viun7g04185 362 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g04185 362 SUPERFAMILY Protein kinase-like (PK-like) 51 349 IPR011009 -
Viun7g04185 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04185 Viun-Chr7 40478349 40483470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04185 5 350 Receptor kinase-like Gene Family AT4G02010 46.132 2.52e-93 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Viun7g04185 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04185 K13436 - gmx:548003 707.597