Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04179 ATGTCCCTTAACTCTTCTCGCCCAGGCTCCAACCCCACCATGCCATACCCATTCTGGATGAGAGGGAATACCCAACTAGGGTTGAACCAAAGGGTGAATCACCCAACAACAAAACAACGCTCCTGGGTTAACGTTCATCCGAGAGAAACACCGCACGTAGCACCACCACTACCACCACCGCCACCCATAGTTACCAACGTCAAAGCAAGTGACTTGCTGAAAGAACAATTGCTCCGTGTGCCAGCATTAGCCAGGGTTCTCGGTGGCACTTGGTCGCGCACCACGGCGGGGGCACAACCGGCACCGCCGCTCAGGCCCAGGCTTCATCGTTTTCTGGACGATTTTGGCACTGAAGCTACCCAGAAGAGTACTCCGCAGAAGCCAAGTGAAGCAGCAACGGTGATTAACAAGGAGAAGGAGGAAGCTGAGAAGAAGAAGGAATCTGAGAAGAAGAAGGAAGCTGAAGCTGAGAAAAAGTACGATGGTCGAATCCATAGCAATCCGCACAAGAAGAACGGGCCTTACACGTGCCCAAAGTGTAAGGGCGTGTTCGAGACTTCTCAGCGGTTTGCATCGCACGTGAGTTCGATTCACTACAAGTTTGAGTCGAAAATTGAGAGAAAGAAGAGGTTGATGGCGAGGTACTATAAGAGAAACCCTCGTGTTGAATGGGTGAATGGTAAACCTACGATTGTTTGGGGAAATAGCAAGAACACTAGTGTGATTGCTCCTCCTCCTCCTCAGGCTCCTCCACCTAGGGTTCTTGTTCCAAAAACTGAGTGTGTTGTTGAGGAGCTTCTTCCTCCTCCTCCTGGATTTGGAAAACCAATTCCTCCTCCTCCGGGATTTGAGAAAGTGAATTATGCTATACCTGGGTTTCACCTTCCTTTTGGATTTCATCATCCTTTTCCTTTTGGATTTCATCAGAAATTACCTGTTGCAGCACCACCCAGAGGTGTCCAAATCAAACTGGAGATTCAGTAG 984 0.4939 MSLNSSRPGSNPTMPYPFWMRGNTQLGLNQRVNHPTTKQRSWVNVHPRETPHVAPPLPPPPPIVTNVKASDLLKEQLLRVPALARVLGGTWSRTTAGAQPAPPLRPRLHRFLDDFGTEATQKSTPQKPSEAATVINKEKEEAEKKKESEKKKEAEAEKKYDGRIHSNPHKKNGPYTCPKCKGVFETSQRFASHVSSIHYKFESKIERKKRLMARYYKRNPRVEWVNGKPTIVWGNSKNTSVIAPPPPQAPPPRVLVPKTECVVEELLPPPPGFGKPIPPPPGFEKVNYAIPGFHLPFGFHHPFPFGFHQKLPVAAPPRGVQIKLEIQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04179 327 MobiDBLite consensus disorder prediction 133 168 - -
Viun7g04179 327 MobiDBLite consensus disorder prediction 118 173 - -
Viun7g04179 327 Coils Coil 132 159 - -
Viun7g04179 327 ProSitePatterns Zinc finger C2H2 type domain signature. 177 198 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04179 Viun-Chr7 40439353 40440567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04179 146 214 C2H2 Transcription Factor Family AT2G18490 57.971 1.61e-18 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun7g04179 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04179 - - var:108325669 306.605