Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04178 ATGGCCATGAACTCGACCAAGTCCAACAACTTTAGCACCACCCTCTTCCCTCTCTTGGCTTCAAACGCAGTGCAAAAAAGCGAAGCTTTAACGGTGAAAGGAATGAGCCAACTTGGGTTGAACCAAAGGGTCAAGAGTCTCAGAAAAATCTCATTGGCCACGAAAAGAAGACCAGTGATGTTTCATGGCGGACTTAGCGCCGCTGAAAAAGGGAAGGGAAAAGAGGTTCTGAGGGCTCACTTTTCGGGTCTGTCACCAACCTCACTACGTGTTGATGGTGGCGACACTGAGAGCATCTTAAGAGCGAGTAAGATAGTGAGAGAAAAACTGGAGCATGCAGTTTGCAACACTCGCACTCAGGAGAGTAATAAGAAAGCCAAGGAAATGCTGCAAGCCAAACTCCTCTCTGCTTCAGCATTCACTTCTGAAAGTGATTCTGTTGGTGAAACTTCGTCAACACAACTAGCGATTATTGCACCAACCCAAAGGGGAAGTTTTATGAACCATTTTGCTTATCCCTTTCCCAACTGTAGCAGTTCCCATTTGTCGCAGGCAGACACTGAGGTTGATAAAAGCATTACCCTTTGTGCAACTCCATTGAGTGTTTGTTTTCCCCACGAAAGCGTTTATGGGGCGAAGAAGACGAGAAACAGAAGCGTGGGTGAAGCGGTTGAGGATGTTTGTGGCGGCAGGGACGATGAGAGCGAATACGATGGTCGGATGCACAGCAATCCGTACAAGAAGAACGGGCCGTACACGTGTCCGAAGTGCGGGTGCGTGTTTGAGACGTCGCAGCGGTTTGCGGCGCACGTGAGTTCGAGGCACTACAGGTACGAGACGAAGAGTGAGAGGAAGAAGAGAATGATGGCGAAAATACGGAGGAGGAGTCTGCGTCTTGAATGGGAAAACGGTGCACTCACTGTTGTTGCTGACGATGCTCCCAGAACAAATAGCAGTGTCTTTGGTTTTGCAGGAAACAATACCAACGTTGCTCCTGCTACTGCTCCTGTTGAAGTGAAGATTGAAAATGAGAGTGGTGTGAGGCTTCAGCTTGCTCCTCCTCCTGGGTGGTCAAAAGTAACTGCTGCTACACCACAATCTGCTGGAGCTGTCAGAATAAAAATGGAGCCATTAGACAATTGA 1143 0.4847 MAMNSTKSNNFSTTLFPLLASNAVQKSEALTVKGMSQLGLNQRVKSLRKISLATKRRPVMFHGGLSAAEKGKGKEVLRAHFSGLSPTSLRVDGGDTESILRASKIVREKLEHAVCNTRTQESNKKAKEMLQAKLLSASAFTSESDSVGETSSTQLAIIAPTQRGSFMNHFAYPFPNCSSSHLSQADTEVDKSITLCATPLSVCFPHESVYGAKKTRNRSVGEAVEDVCGGRDDESEYDGRMHSNPYKKNGPYTCPKCGCVFETSQRFAAHVSSRHYRYETKSERKKRMMAKIRRRSLRLEWENGALTVVADDAPRTNSSVFGFAGNNTNVAPATAPVEVKIENESGVRLQLAPPPGWSKVTAATPQSAGAVRIKMEPLDN 380
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04178 380 ProSitePatterns Zinc finger C2H2 type domain signature. 254 275 IPR013087 -
Viun7g04178 380 ProSiteProfiles Zinc finger C2H2 type domain profile. 252 280 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun7g04178 Viun-Chr7 40433083 40434440 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04178 231 302 C2H2 Transcription Factor Family AT2G18490 55.556 2.12e-21 91.7
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun7g04178 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04178 - - vun:114189574 748.814