Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04161 ATGGCAGTTATTCAAGCAAACAAATTGTTGGAGGATCAGAGCCAACTTGAATCTGGACCCTTGAGTTTAACTGAGGGAACTCCTCTTGGAACTTTTGTTGGTATCTACGATGGCCATGGAGGTCCAGAAGCTTCCCGCTTTGTCAATGACAGTCTCTTTAAGAATATCAGGACAGAATTTTCTTCTGAAAACGATGGAATGTCAGCTGATGTTGTCCATAGAGCATTCTTGGCAACTGAAGAAGAATTTCTTTCTCTGGTAGAGAAGCAATGGCTGCATAAGCCGCCTCTAGCGTCGGTTGGATCTTGCTGTTTGATAGGCATAATATGTTGTGGGGAGCTCTATATTGGAAATGCAGGAGATTCTCGTGCAGTGTTAGGTAGAATGGATGAGGCTACTAAAGAGATTAAAGCTATTCAACTCTCCGAGGAGCACAATGCTAGCATAGTATCTGTCAGAGAAGAGTTGCGCTCATTGCATCCTGATGATCCGCAGATAGTGGTTATGAAGCACCAGGTCTGGCGCGTGAAGGGTCTCATTCAGATTTCAAGATCCATTGGTGATGCGTACCTAAAGAGGGTAGAGTTTAACAGAGCACCATTATTGTCAAAATTTCGACTCCCAGAACCCTTTGAGCAGCCAATCCTTAAAGCCGAACCAGCAATACTGGTACAGAAATTGTGTCCTCAAGATCAGTTTCTCATATTTGCATCAGATGGGTTATGGGAGCATCTGAGTAGTCAAGAAGCAGTTGACATTGTCCAAAGTTGTCCACGCAATGGAGTGGCAAAGAAACTTGTGAAAACAGCACTTTGTGAAGCTGCGAAGAAAAGAGAAACGAGATACTCAGACTTGAAAAAGATTGACAGAGGGGTGAGGAGACATTTCCACGATGACATCACGGTTATAGTTTTGTATCTTGATTCAAATTTTTTGGCCCGTGCCAATTCTCGTGTACCCTTGGTTTCTATCAAAGGAGGTGGTGAAAATGGTTATGGTATTGGAATTATAGATGCCTAG 1020 0.4314 MAVIQANKLLEDQSQLESGPLSLTEGTPLGTFVGIYDGHGGPEASRFVNDSLFKNIRTEFSSENDGMSADVVHRAFLATEEEFLSLVEKQWLHKPPLASVGSCCLIGIICCGELYIGNAGDSRAVLGRMDEATKEIKAIQLSEEHNASIVSVREELRSLHPDDPQIVVMKHQVWRVKGLIQISRSIGDAYLKRVEFNRAPLLSKFRLPEPFEQPILKAEPAILVQKLCPQDQFLIFASDGLWEHLSSQEAVDIVQSCPRNGVAKKLVKTALCEAAKKRETRYSDLKKIDRGVRRHFHDDITVIVLYLDSNFLARANSRVPLVSIKGGGENGYGIGIIDA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04161 339 ProSitePatterns PPM-type phosphatase domain signature. 32 40 IPR000222 GO:0043169
Viun7g04161 339 Pfam Protein phosphatase 2C 25 280 IPR001932 -
Viun7g04161 339 SMART PP2C_4 11 305 IPR001932 -
Viun7g04161 339 PANTHER PROTEIN PHOSPHATASE 4 305 IPR015655 GO:0004722|GO:0006470
Viun7g04161 339 FunFam Phosphatase 2C family protein 1 317 - -
Viun7g04161 339 Gene3D - 1 317 IPR036457 -
Viun7g04161 339 CDD PP2Cc 1 307 IPR001932 -
Viun7g04161 339 ProSiteProfiles PPM-type phosphatase domain profile. 1 307 IPR001932 -
Viun7g04161 339 SUPERFAMILY PP2C-like 12 308 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04161 Viun-Chr7 40332430 40335675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04161 1 329 PP2C-type Phosphatase Gene Family AT3G12620 73.556 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04161 K01102 - gmx:100807559 581.637