Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04160 ATGGTATCAGCTACAATTAGGCGAATTGTGTCACCCTGTTGGAGACCATCTGATACGGGTGAAATTTCTGGTAGGCATGGAGATTCAAATGGCCGTGTTGATGGTTTGTTGTGGTACAAAGATTCTGGAAGACATGCGCATGGTGAATTCTCGATGGCAGTTATTCAAGCAAACAAATTGTTGGAGGATCAGAGCCAACTTGAATCTGGACCCTTGAGTTTAACTGAGGGAACTCCTCTTGGAACTTTTGTTGGTATCTACGATGGCCATGGAGGTCCAGAAGCTTCCCGCTTTGTCAATGACAGTCTCTTTAAGAATATCAGGACAGAATTTTCTTCTGAAAACGATGGAATGTCAGCTGATGTTGTCCATAGAGCATTCTTGGCAACTGAAGAAGAATTTCTTTCTCTGGTAGAGAAGCAATGGCTGCATAAGCCGCCTCTAGCGTCGGTTGGATCTTGCTGTTTGATAGGCATAATATGTTGTGGGGAGCTCTATATTGGAAATGCAGGAGATTCTCGTGCAGTGTTAGGTAGAATGGATGAGGCTACTAAAGAGATTAAAGCTATTCAACTCTCCGAGGAGCACAATGCTAGCATAGTATCTGTCAGAGAAGAGTTGCGCTCATTGCATCCTGATGATCCGCAGATAGTGGTTATGAAGCACCAGGTCTGGCGCGTGAAGGGTCTCATTCAGATTTCAAGATCCATTGGTGATGCGTACCTAAAGAGGGTAGAGTTTAACAGAGCACCATTATTGTCAAAATTTCGACTCCCAGAACCCTTTGAGCAGCCAATCCTTAAAGCCGAACCAGCAATACTGGTACAGAAATTGTGTCCTCAAGATCAGTTTCTCATATTTGCATCAGATGGGTTATGGGAGCATCTGAGTAGTCAAGAAGCAGTTGACATTGTCCAAAGTTGTCCACGCAATGGAGTGGCAAAGAAACTTGTGAAAACAGCACTTTGTGAAGCTGCGAAGAAAAGAGAAACGAGATACTCAGACTTGAAAAAGATTGACAGAGGGGTGAGGAGACATTTCCACGATGACATCACGGTTATAGTTTTGTATCTTGATTCAAATTTTTTGGCCCGTGCCAATTCTCGTGTACCCTTGGTTTCTATCAAAGGAGGTGGTGAAAATGGTTATGGTATTGGAATTATAGATGCCTAG 1173 0.4339 MVSATIRRIVSPCWRPSDTGEISGRHGDSNGRVDGLLWYKDSGRHAHGEFSMAVIQANKLLEDQSQLESGPLSLTEGTPLGTFVGIYDGHGGPEASRFVNDSLFKNIRTEFSSENDGMSADVVHRAFLATEEEFLSLVEKQWLHKPPLASVGSCCLIGIICCGELYIGNAGDSRAVLGRMDEATKEIKAIQLSEEHNASIVSVREELRSLHPDDPQIVVMKHQVWRVKGLIQISRSIGDAYLKRVEFNRAPLLSKFRLPEPFEQPILKAEPAILVQKLCPQDQFLIFASDGLWEHLSSQEAVDIVQSCPRNGVAKKLVKTALCEAAKKRETRYSDLKKIDRGVRRHFHDDITVIVLYLDSNFLARANSRVPLVSIKGGGENGYGIGIIDA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04160 390 PANTHER PROTEIN PHOSPHATASE 40 356 IPR015655 GO:0004722|GO:0006470
Viun7g04160 390 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Viun7g04160 390 CDD PP2Cc 50 358 IPR001932 -
Viun7g04160 390 Gene3D - 38 368 IPR036457 -
Viun7g04160 390 FunFam Phosphatase 2C family protein 38 368 - -
Viun7g04160 390 ProSiteProfiles PPM-type phosphatase domain profile. 46 358 IPR001932 -
Viun7g04160 390 SUPERFAMILY PP2C-like 58 359 IPR036457 -
Viun7g04160 390 SMART PP2C_4 41 356 IPR001932 -
Viun7g04160 390 Pfam Protein phosphatase 2C 76 331 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04160 Viun-Chr7 40332430 40335675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04160 3 380 PP2C-type Phosphatase Gene Family AT3G12620 72.823 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04160 K01102 - gmx:100807559 670.618