Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04131 ATGCCACTTCGAGCTCGCACTGTAACTGCAAGCTTGCGGCGGTCTCTTCATTGTCTCCACCATAGCTTTTGTTCTTTGTCTCTATCAAAACCTCAGTTTTCTGCCAATTGCCATGAATTTTTGCCATGGTTGGAGCGGAAAGCTGATTCTGCAGTTTCTTCCTCACTTTTCATCGGGAAATCTTCGTATGGAAGGTCTCTGTTTGCTTCCAAGACAATACAAACTGGAGATTGCATTTTAAAGGTTCCTTACAGAGTGCAAATAACTGCTGATAATCTCCCTCCCGAAATCAAATCTTTGATTGGCGAGGAAGTGGGAAATATTGCGAAACTTGCTATTGTTATTCTCATTGAGAAGAAATTGGGTCAGGGTTCTGAATGGTATCCTTATATCAGCTGTCTTCCACAGCAAAGGGAGCAGCACAATACGGTATTTTGGAATGAAAGTGAGTTGGAGATGATTCGTCCAAGTTCAGTTTATCAAGAAACTATTGACCATAAGTCTCAAATTGAAAAGGACTTTCTGACAATCAAGCGTGTTTTTGAATCTTTCCATCTAAGTTTTGAAGATTTTACCTTCAAGGACTTCATGCATGCATGCACACTAGTTGGTTCTCGAGCATGGGGAAGCACAAAGGGTTTAGCTCTGATTCCATTTGCAGATTTCTTAAACCATGATGGACTTTCAGAAGCAATTGTAATGAGTGATGATGACAAACAATGCTCAGAAATTATTGCTGATCGTGACTATGCCCCTGGTGAACAGGTCCTAATAAGATATGGAAAGTTTTCAAATGCTACACTAGTGCTGGACTTTGGTTTTTCAATTCCATACAACATTTACGATCAGGTTAAGATCCAGATTGATGTACCTAAGCATGACCCTTTGCATGACATGAAGTTAGAACTCTTGCATCGAAACATTGTACCTCATCCTGAAGATATGGAGGACTTGACATGTCCCGTGAATACCTTCAGTATCAAGGAGGTGAAGTCGGATAGAGGAAAAGGGAAGGGTCTTCCACAGTCACTTCGTGCGCTTGCTCGTGTTCTTTCTTGTACCACATCTCAGGAACTTAACGATTTGGTCGAGGAAGCTGCTCAAAATGATGGCAGGCTGGCTAGGCGTCCTTTAAAGGATATCAGCAAAGAGATACAAGCACACTTGATGTTGTTATCGGTATTCATCCAATTAATTGAGGAGCGCAATGCGATTATTATGTCACTGGGTTCTTGTCGTAGCCCTCCCTTGTGTGAAAGACTTTCTGTTAGAAGAACAATGGCTCAAGATCTCCTAAACGGTGAGCTTCGCATTCTCAAATCTGTTTCTGCCTGGCTGGAGAACTACTGTGTCTCCTTGACTTCATAG 1368 0.4189 MPLRARTVTASLRRSLHCLHHSFCSLSLSKPQFSANCHEFLPWLERKADSAVSSSLFIGKSSYGRSLFASKTIQTGDCILKVPYRVQITADNLPPEIKSLIGEEVGNIAKLAIVILIEKKLGQGSEWYPYISCLPQQREQHNTVFWNESELEMIRPSSVYQETIDHKSQIEKDFLTIKRVFESFHLSFEDFTFKDFMHACTLVGSRAWGSTKGLALIPFADFLNHDGLSEAIVMSDDDKQCSEIIADRDYAPGEQVLIRYGKFSNATLVLDFGFSIPYNIYDQVKIQIDVPKHDPLHDMKLELLHRNIVPHPEDMEDLTCPVNTFSIKEVKSDRGKGKGLPQSLRALARVLSCTTSQELNDLVEEAAQNDGRLARRPLKDISKEIQAHLMLLSVFIQLIEERNAIIMSLGSCRSPPLCERLSVRRTMAQDLLNGELRILKSVSAWLENYCVSLTS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04131 455 FunFam Predicted protein 277 452 - -
Viun7g04131 455 Gene3D - 277 450 IPR036464 -
Viun7g04131 455 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 20 389 - -
Viun7g04131 455 SUPERFAMILY SET domain 37 279 IPR046341 -
Viun7g04131 455 Pfam SET domain 64 261 IPR001214 GO:0005515
Viun7g04131 455 Gene3D set domain protein methyltransferase, domain 1 7 274 - -
Viun7g04131 455 Pfam Rubisco LSMT substrate-binding 292 408 IPR015353 -
Viun7g04131 455 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 33 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04131 Viun-Chr7 40205441 40211725 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g04131 SET 9.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04131 K19199 - gmx:100818002 714.146