Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04106 ATGGCCATGATAACCAATCTTTTTGCAATGGCCACTACAAGTTCTCTCTCTATGTCTTTTCCCGGTTTCAAACTAAAACTTTGTCTGACTTTGATTGCATGTGTTGTTGGTTTTACTTCAGCTCAGTTATCTACTAAATTCTACGAAAAAAGTTGCCCTGGTGCTCTTGTCACCATAAGGAAAGCAGTTAAACAAGCTGTGCAGAATGAGTCTCGCATGGGAGCATCCCTGCTCCGACTGCATTTCCATGATTGCTTCGTTCAAGGATGTGATGCATCAGTGTTGTTAGACGACACGGATACTTTCACTGGGGAGAAGAATTCATTTCCAAATGCTAACTCTCTCAGGGGTTTTGATGTGATAGATAGCATAAAATCAGATTTGGAGAACATGTGCAAAGGTGTTGTCTCTTGTGCCGACATCTTAGCCGTTGCTGCCAGAGACGCTGTTTTTGAACTTGGTGGACCAAGATGGGAAGTACCATTAGGAAGAAGAGATTCAACCACAGCAAGTTTAGCCGAATCCAACTCAGACTTACCAGCTCCTTTTTTCGATCTTGATGGCCTCGCCAGTGCTTTCGCCAAGAAAAATTTCACTGTGAAAGAACTAGTTGCTTTATCAGGTGGTCACTCGGTAGGACTGGTGAGGTGCCGTTTCTTCAGAAAGAGGATTTATAACGAGAGCAACATCGACACGACATTTGCAGAGGATAGGCGACAAGATTGTCCCTTCGAAGGTGGTGACAACAACTTAACTGCTTTCGATTCGACCACTCCTTTCAGATTTGACAATGCGTTTTACAAGAACTTGTTGGTGCAAAAGGGTCTTGTCCACTCCGATCAACAACTCTTCAACGACGTCAATGGAACTGATAGCCCCACAAAGGATCAAGTAATTCGTTATGCCAGAGACATGGGTAAATTCAAGAAGGATTTTGCAGATGCAATGTTGAAGATGAGCATCATGACCCCACTTACTGGTTCAGACGGTGAGATCAGGCAAAACTGCAGGGTTGTTAATCCTCCTTCAACCTGA 1035 0.4377 MAMITNLFAMATTSSLSMSFPGFKLKLCLTLIACVVGFTSAQLSTKFYEKSCPGALVTIRKAVKQAVQNESRMGASLLRLHFHDCFVQGCDASVLLDDTDTFTGEKNSFPNANSLRGFDVIDSIKSDLENMCKGVVSCADILAVAARDAVFELGGPRWEVPLGRRDSTTASLAESNSDLPAPFFDLDGLASAFAKKNFTVKELVALSGGHSVGLVRCRFFRKRIYNESNIDTTFAEDRRQDCPFEGGDNNLTAFDSTTPFRFDNAFYKNLLVQKGLVHSDQQLFNDVNGTDSPTKDQVIRYARDMGKFKKDFADAMLKMSIMTPLTGSDGEIRQNCRVVNPPST 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04106 344 Pfam Peroxidase 60 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 CDD secretory_peroxidase 42 339 IPR033905 GO:0004601|GO:0042744
Viun7g04106 344 SUPERFAMILY Heme-dependent peroxidases 42 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Viun7g04106 344 FunFam Peroxidase 180 319 - -
Viun7g04106 344 Gene3D - 46 337 - -
Viun7g04106 344 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 FunFam Peroxidase 46 182 - -
Viun7g04106 344 ProSiteProfiles Plant heme peroxidase family profile. 42 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 PANTHER PEROXIDASE 72-RELATED 38 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun7g04106 344 Gene3D Peroxidase, domain 2 180 319 - -
Viun7g04106 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04106 Viun-Chr7 40121595 40123169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04106 41 340 Peroxidase AT5G05340 54.455 7.52e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04106 K00430 - gmx:100802244 518.85