Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04099 ATGATCTCAAACTCCGACCCTGTAGAACCACTCACTGCGGCCGCGGCCACCCCCGCCGTCGCGGTAACCGCTTCGTCTTCCGCTGAAGGTCAGCCTGCACCGCCGGCGACGCCAAACATTGTGATGTCCTCCAAGGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGCTTTCTCTCTGGAAGTCGAAGTGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCATCAATGGAGGATTTCTTTGAGACCACCATATCAGAGGTCGATGGTCAGATGGTTGCGTTTTTTGGTGTTTTTGATGGTCACGGAGGTTCCCGGACTGCAGAATATCTGAAAAATAATCTATTTAAGAATTTGAGTAGCCATCCTGACTTCTTTAAAGACACAAAGACTGCTATAGTAGAAGCATTTAAACAGACAGATATCGACTACCTCAATGAGGAAAAAGGCCATCAAAGAGATGCTGGGTCAACTGCATCAACAGCTATGTTGTTGGGGGACCGAATTGTTGTTGCAAATGTTGGTGATTCCAGAGTAGTTGCAAGTAGAGCTGGTTCAGCTATTCCTTTATCTATTGATCACAAGCCTGATAGATCTGATGAACGTCAAAGGATTGAAAAGGGGGGATTTATAATCTGGGCTGGAACATGGAGGGTTGGTGGTGTTCTTGCAGTGTCCCGTGCATTTGGCGACAAACTTCTTAAGCCTTACGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGACGGTGTAGATTTTATTATAATTGCTAGTGATGGCCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCATCGAGAGAACTTATAAAAGAAGCTTATGCACGGGGAAGCTCAGATAACATCACTAGTGTTGTTGTTCGATTTGATATATCCTGA 948 0.4515 MISNSDPVEPLTAAAATPAVAVTASSSAEGQPAPPATPNIVMSSKDHDSLFSGGGISFLSGSRSGRFSYGYSSFKGKRSSMEDFFETTISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFFKDTKTAIVEAFKQTDIDYLNEEKGHQRDAGSTASTAMLLGDRIVVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEKAXGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITSVVVRFDIS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04099 316 CDD PP2Cc 67 313 IPR001932 -
Viun7g04099 316 PANTHER PROTEIN PHOSPHATASE 48 313 IPR015655 GO:0004722|GO:0006470
Viun7g04099 316 SUPERFAMILY PP2C-like 62 314 IPR036457 -
Viun7g04099 316 ProSitePatterns PPM-type phosphatase domain signature. 99 107 IPR000222 GO:0043169
Viun7g04099 316 SMART PP2C_4 57 311 IPR001932 -
Viun7g04099 316 MobiDBLite consensus disorder prediction 25 44 - -
Viun7g04099 316 Gene3D - 62 315 IPR036457 -
Viun7g04099 316 ProSiteProfiles PPM-type phosphatase domain profile. 68 313 IPR001932 -
Viun7g04099 316 Pfam Protein phosphatase 2C 69 306 IPR001932 -
Viun7g04099 316 FunFam probable protein phosphatase 2C 59 60 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04099 Viun-Chr7 40077796 40082728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04099 40 316 PP2C-type Phosphatase Gene Family AT1G43900 73.285 2.45e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04099 K17506 - gmx:100776867 522.702