Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04077 ATGATGGTTTCTCGGGGGCTGTTCGGGTGGTCCCCGCCGCATATACAGCCTCTCACGCCGGTCTCCGAGGTTTCGGAGCCGCCGGAGTCGCCGTCTCCGTATCTGGACCTCGGTGCCGAGACCTCCGCGTCGCAGCCGATGGAGGTCGAGGAAGAGATGGAGGAGGCTGAGGAGATTGAGCCGCCTCCCGCCGCCGTTCCCTTCTCTCACCTCTTCGCCTGTGCCGACCGCCTCGACTGGTTTCTCATGATCGTCGGCTCCCTCGCCGCCGCTGCTCACGGCACCGCTCTCGTCGTTTACTTGCATTACTTCGCCAAGGTTCTCTGGGTTCCTCAGCAGGGTTCGGCGGAAGATCAGTTTCATAGGTTCAAGGAGCTTGCTTTAACCATTGTGTATATTGCTGGGGGAGTTTTTGCTGCTGGTTGGATTGAGGTTTCGTGTTGGATTCTTACTGGAGAACGGCAGACTGCTGTGATCAGATCAAAATATGTCCAAGTATTACTTAACCAAGATATGAGTTTTTTTGATACTTATGGAAATAATGGAGACATTGTGAGTCAAGTATTAAGTGATGTGCTGCTCATTCAGTCTGCTCTTAGTGAAAAGGTTGGGAATTATATTCATAATATGGCAACATTCTTCAGTGGTCTTGTTATTGCTTTTATCAATTGTTGGCAGATTGCATTGATAACATTAGCTACAGGTCCATTTATTGTTGCTGCAGGAGGAATATCTAATATATTCCTCCACAGACTTGCCGAGAATATTCAAGATGCATATGCTGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCCTACATAAGGACCTTATATGCATTTACAAATGAAACGTTGTCTAAATATTCATATGCAACATCACTTCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGCCTTGGTTTTACTTATGGACTTGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGCTCCTGGTTATAAATGGAAAAGCTCATGGTGGTGAAATTATAACAGCTCTGTTTGCTGTGATTCTAAGTGGCTTGGGTTTGAATCAAGCAGCCACAAATTTCTACTCATTTGATCAAGGGCGCATAGCTGCCTATAGACTATTTGAGATGATTAGTCGATCATCCTCATCTTTTAATCATGATGGCAGTGCTCCAGCTTCTGTGCAAGGAAATATAGAGTTCCGGAATGTATACTTCAGTTATCTTTCTCGCCCTGAAATCCCTATCTTGAGTGGGTTTTATCTCACTGTTCCTGCTAAAAAGACTGTGGCACTTGTTGGAAGAAATGGCTCTGGTAAAAGTAGTATTATTCCCCTTATGGAGCGATTCTATGATCCAACTTTAGGGGAAGTTCTTTTAGATGGTGAAAATATAAAGAATATGAAACTGGAATGGTTAAGGAGTCAGATAGGACTGGTCACCCAAGAACCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCTTATGGCAGAGATACCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACCTTTATCAGTTCATTAGATAAAGGTTATGACACACAGGTTGGCAGGGCTGGTCTAGCATTAACTGAAGAGCAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTCTTCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAAGCTCTGGATCTGCTAATGTTGGGACGCTCAACGATAATAATTGCTCGAAGGCTTAGTCTTATAAAGAATGCTGATTATATAGCTGTCATGGAGGATGGTCAACTTGTTGAAATGGGTACACATGATGAGTTACTGACCCTGGATGGCTTATATGCAGAGCTTCTTCGATGTGAAGAAGCCACAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAACTTTCCAAATTGAGAAGGATTCTTCAGAAAGTCACAGCTTCAAAGAACCTTCATCTCCTAAAATGATAAAGTCGCCCTCTCTTCAAAGAGTTTCTGCCATTTTCCGGCCTTCGGATGGCTTTTTTAATTCACAAGAATCACCAAAAATTCGGAGCCCACCATCGGAGAAGATGATGGAAAATGGACAGTCTTTAGATTCAGCAGATAAGGAGCCATCAATTAAAAGGCAGGATAGTTTTGAAATGAGACTACCGGAGTTACCCAAGATTGATGTTCAGTGTGTGCATAGACAAAAGTCAAATGGTTCTGACCCAGAATCCCCTGTTTCACCGCTTTTAACATCTGATCCTAAAAATGAACGCTCCCATTCACAGACTTTTAGCAGGCTTGATAGTCATTCTGGTGATCTTTCTGTGAAAATGACTGAAACAACAGACGCGAGGCATCGAAAACAACCCTCAATTTGGAGGCTAGCAGAACTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCACAGGCGCTGCTATCTTTGGTTCGTTCAATCCCCTTCTTGCCTATGTTATTGGTCTGGTGGTGACAGATTACTATAAAATTGATGAGGCACATCACTTCCAAAGAGAGATAGATAAATGGTGCTTGATCATTGCCTGCATGGGTATTGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGGGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAACGGGATGGTTTGATGAAGAGGAAAATAGTGCTGACAATCTATCGATGCGCTTGGCCAATGATGCTACATTTGTGCGAGCAGCTTTCAGTAACCGTCTTTCCATATTTATACAGGACAGTGCTGCAGTTATTGTTGCATTTCTCATTGGTGTTTTGCTGCACTGGCGATTGGCACTTGTGGCTTTAGCAACACTTCCAGTTCTTTGTGTTTCGGCTGTTGCCCAGAAATTATGGCTTGCTGGATTTTCAAAGGGCATACAAGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGACGCAGTTAGGAATATTTACACTGTTGTTGCATTTTGTGCTGGTAACAAGGTGATGGAACTCTACCAATTACAGTTAAATAAAATATTTAAGCAAAGCTTTCTGCATGGAGTGGCCATTGGTTTTGCCTTTGGCTTTTCACAGTTTCTGCTCTTTGCATGTAATGCCCTTCTACTTTGGTACACTGCAATATGTATAAATAAGAGTTATGTGGATACACCTACCGCTCTCAAGGAGTACATGGTTTTCTCATTTGCTACATTTGCCCTTGTGGAGCCTTTTGGGTTGGCTCCTTACATACTTAAGCGTCGTAAATCTCTCATATCAGTGTTTGAAATTATAGATCGTGTGCCTAAGATTGATCCTGATGATAGCAAAGCAATGAAGCCACCCAATGTATATGGGAGCATTGAGTTGAAAAATGTTGATTTTTGTTATCCTTCCCGACCGGAAGTGTTGGTGTTAAGCAATTTTAGCCTCAAAGTCAATGGAGGGCAAACAATTGCTGTAGTGGGAGTTTCGGGGTCAGGGAAGAGCACAATAATATCTTTGATCGAGAGATTCTACGATCCAGTTTCTGGCCAAGTTTTGCTAGATGGGAGGGATTTAAAGCAATATAATTTGAGATGGTTGCGGAGCCACCTTGGTCTGGTTCAGCAGGAACCGATTATCTTCTCAACAACCATAAGGGAAAACATCATATATGCCAGGCATAATGCCAGTGAAGCTGAAATAAAGGAGGCTGCAAGAATAGCAAATGCTCATCACTTCATTAGTAGCTTGCCTCATGGTTACGACACTCATGTTGGGATGAGAGGTGTTGACTTAACCCCTGGACAAAAACAGAGAATTGCAATTGCAAGGGTAATTCTTAAAAATGCTCCTATTTTGTTGCTGGATGAAGCTAGTTCATCTATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTAGACACCCTAGTAATGGGAAACAAAACCACTATTTTAATAGCACACAGAGCTGCAATGATGAGGCACGTGGACAACATAGTAGTTCTTAATGGAGGAAGGATAGTGGAGGAGGGGACCCATGATTCATTGGTGGCAAAAAATGGTCTGTATGTACGATTGATGCAACCTCATTTTGGTAAGGCTTTGCGTCAGCATCGGCTTGTTTAG 4200 0.4286 MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDLGAETSASQPMEVEEEMEEAEEIEPPPAAVPFSHLFACADRLDWFLMIVGSLAAAAHGTALVVYLHYFAKVLWVPQQGSAEDQFHRFKELALTIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLSKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRLLVINGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFNHDGSAPASVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNMKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDTTMDQIEEAAKIAHAHTFISSLDKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEDGQLVEMGTHDELLTLDGLYAELLRCEEATKLPKRMPVRNYKETATFQIEKDSSESHSFKEPSSPKMIKSPSLQRVSAIFRPSDGFFNSQESPKIRSPPSEKMMENGQSLDSADKEPSIKRQDSFEMRLPELPKIDVQCVHRQKSNGSDPESPVSPLLTSDPKNERSHSQTFSRLDSHSGDLSVKMTETTDARHRKQPSIWRLAELSFAEWLYAVLGSTGAAIFGSFNPLLAYVIGLVVTDYYKIDEAHHFQREIDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNETGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAFLIGVLLHWRLALVALATLPVLCVSAVAQKLWLAGFSKGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYQLQLNKIFKQSFLHGVAIGFAFGFSQFLLFACNALLLWYTAICINKSYVDTPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSKAMKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTIAVVGVSGSGKSTIISLIERFYDPVSGQVLLDGRDLKQYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEIKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVILKNAPILLLDEASSSIESESSRVVQEALDTLVMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGKALRQHRLV 1399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04077 1399 MobiDBLite consensus disorder prediction 695 725 - -
Viun7g04077 1399 FunFam ABC transporter B family member 20 393 640 - -
Viun7g04077 1399 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 81 370 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g04077 1399 FunFam ABC transporter B family member 20 70 406 - -
Viun7g04077 1399 Gene3D - 1148 1387 IPR027417 -
Viun7g04077 1399 MobiDBLite consensus disorder prediction 754 778 - -
Viun7g04077 1399 Pfam ABC transporter 1168 1316 IPR003439 GO:0005524
Viun7g04077 1399 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1150 1387 IPR003439 GO:0005524
Viun7g04077 1399 FunFam ABC transporter B family member 20 1140 1389 - -
Viun7g04077 1399 Gene3D - 393 640 IPR027417 -
Viun7g04077 1399 Pfam ABC transporter transmembrane region 84 353 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g04077 1399 Pfam ABC transporter transmembrane region 835 1085 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g04077 1399 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 827 1074 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g04077 1399 FunFam ABC transporter B family member 6 767 995 - -
Viun7g04077 1399 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 403 638 IPR003439 GO:0005524
Viun7g04077 1399 FunFam ABC transporter B family member 6 997 1147 - -
Viun7g04077 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1139 1386 IPR027417 -
Viun7g04077 1399 SUPERFAMILY ABC transporter transmembrane region 71 378 IPR036640 GO:0005524|GO:0016020
Viun7g04077 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 637 IPR027417 -
Viun7g04077 1399 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 378 - -
Viun7g04077 1399 CDD ABC_6TM_Pgp_ABCB1_D2_like 822 1133 - -
Viun7g04077 1399 MobiDBLite consensus disorder prediction 754 795 - -
Viun7g04077 1399 Gene3D ABC transporter type 1, transmembrane domain 1101 1147 IPR036640 GO:0005524|GO:0016020
Viun7g04077 1399 Gene3D ABC transporter type 1, transmembrane domain 766 991 IPR036640 GO:0005524|GO:0016020
Viun7g04077 1399 PANTHER ABC TRANSPORTER B FAMILY 48 838 IPR039421 -
Viun7g04077 1399 SMART AAA_5 1177 1364 IPR003593 GO:0016887
Viun7g04077 1399 SMART AAA_5 430 609 IPR003593 GO:0016887
Viun7g04077 1399 MobiDBLite consensus disorder prediction 659 730 - -
Viun7g04077 1399 Gene3D ABC transporter type 1, transmembrane domain 70 654 IPR036640 GO:0005524|GO:0016020
Viun7g04077 1399 MobiDBLite consensus disorder prediction 19 45 - -
Viun7g04077 1399 SUPERFAMILY ABC transporter transmembrane region 814 1135 IPR036640 GO:0005524|GO:0016020
Viun7g04077 1399 Coils Coil 249 269 - -
Viun7g04077 1399 Pfam ABC transporter 424 568 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04077 Viun-Chr7 39888930 39898673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04077 46 696 Calmodulin-binding Proteins AT2G36910 43.247 9.68e-162 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04077 K05658 - gmx:100799399 2609.71