Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04067 ATGGTGAACGTGGTGGAATTGCAGAAACAGCTGCAGAGGTGGCAGCAGCAGACTGGGAACAACAACAATGTCAATGTCGACGCCAACGGAGAACTCATGTATGTCAAAGTCATGACCGATGAACAGTTGGAAACTCTGAGGAAACAAATTGCTGTCTATGCCACCATTTGTGACCAACTCATCGAGATGCACAGAACACTCTCAGCTCAGCAGGATCTTGCAGGGGCTAGATTGGGAAACCTGTACTGTGATCCATTGATGACATCTGGTGGACACAAAATAACATCAAGACAAAGGTGGACACCTACACCAGTGCAGCTTCAGATTCTGGAACGCATATTTGATCAGGGAAATGGAACTCCAAGCAAGGAAAAAATCAAAGAGATAACTGCTGAACTGGGCCAGCATGGTCAAATTTCTGAAACAAATGTGTACAATTGGTTTCAGAATAGGCGTGCTCGATCCAAAAGAAAACTGCAAAATGTGGCTCCTACCAACACTGAATCAGAAGTGGACACCGAGGTTGATTCTAAGGATAAGAAGACAAAACCTGATGAGTTTCTGTCTCAACATAACATAACAACAACTTCTTCTGGAGGAGCTGAAAAACTGTGCTTTCAGAGCCCTCAGGTGTACTCTGAGTTGCAGTACTTGAACAATGATTCCAACAAGCCCTATTCCATGTTTCCATCAGATGCCAGTTTGAAATCCACAAGAAATTTGTCTGTTTTTAACCAGGTGCTGTCAAATTCAAGGAATGAGTATGCAGGTGGAAAAATGGAAGTTGGTGGATCAGTGAGCTATAATTTATTCCACCAAACAGGAGACTGTAATCTTGGAGGTTGA 846 0.4326 MVNVVELQKQLQRWQQQTGNNNNVNVDANGELMYVKVMTDEQLETLRKQIAVYATICDQLIEMHRTLSAQQDLAGARLGNLYCDPLMTSGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITAELGQHGQISETNVYNWFQNRRARSKRKLQNVAPTNTESEVDTEVDSKDKKTKPDEFLSQHNITTTSSGGAEKLCFQSPQVYSELQYLNNDSNKPYSMFPSDASLKSTRNLSVFNQVLSNSRNEYAGGKMEVGGSVSYNLFHQTGDCNLGG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04067 281 PANTHER WUSCHEL-RELATED HOMEOBOX 13 16 268 IPR044559 GO:0003700
Viun7g04067 281 CDD homeodomain 97 158 IPR001356 GO:0003677
Viun7g04067 281 Gene3D - 99 163 - -
Viun7g04067 281 MobiDBLite consensus disorder prediction 156 183 - -
Viun7g04067 281 Pfam Homeodomain 97 157 IPR001356 GO:0003677
Viun7g04067 281 ProSiteProfiles 'Homeobox' domain profile. 93 158 IPR001356 GO:0003677
Viun7g04067 281 SMART HOX_1 95 162 IPR001356 GO:0003677
Viun7g04067 281 SUPERFAMILY Homeodomain-like 95 159 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04067 Viun-Chr7 39832324 39834352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04067 4 281 Wox Gene Family AT4G35550 49.158 2.19e-85 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Viun7g04067 Homeodomain 8.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04067 - - pvu:PHAVU_007G011600g 477.248