Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04060 ATGGAAGAGATGTCGAGTTCAGCAACAGCAATAAACTCTTCCAATATTGGATTTCAACTATTGAAGAAACAAGGTTGGAAAGAAGGGACTGGTCTTGGAGTATCTGAGCAGGGTAGATTAGAACCTGTGGAAACTTATGTAAAGAATAATAAACGAGGTTTGGGAGCAGATAAAGTGAAGAAAAAGGCTGTGAAAGTGAAACCGGATCATAGCGATTCCTCTAAAGGGACCAGTCAAGAGGATCATTTACCTCAAAAGAAAAGCAAAGCATTGTCTAAACGGATGAGAAAGATGCAGGAGTTTGAGAAGAAAATGCAAGAGAAGGAGTTTGAACGAGCTTTTTACAGAGAGTTCTGGCCAGAAAATGTATAA 372 0.3925 MEEMSSSATAINSSNIGFQLLKKQGWKEGTGLGVSEQGRLEPVETYVKNNKRGLGADKVKKKAVKVKPDHSDSSKGTSQEDHLPQKKSKALSKRMRKMQEFEKKMQEKEFERAFYREFWPENV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04060 123 PANTHER BAT4 PROTEIN-RELATED 3 123 IPR039146 -
Viun7g04060 123 Pfam G-patch domain 14 56 IPR000467 GO:0003676
Viun7g04060 123 MobiDBLite consensus disorder prediction 31 100 - -
Viun7g04060 123 ProSiteProfiles G-patch domain profile. 13 59 IPR000467 GO:0003676
Viun7g04060 123 SMART G-patch_5 11 57 IPR000467 GO:0003676
Viun7g04060 123 MobiDBLite consensus disorder prediction 51 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04060 Viun-Chr7 39795632 39798205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04060 3 55 C2H2 Transcription Factor Family AT5G26610 49.057 8.21e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04060 - - gmx:100812494 189.504