Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04058 ATGGATTTGGACCAGTGGATCTTGAAGGTTAAAGATGGCCAACATCTTCTTGAAGACGAGCTTCAACTTCTCTGCGAATATGTAAAAGAGATCCTTATCGAGGAGTCCAATGTGCAACCTGTCAATAGTCCGGTCACTGTTTGTGGTGATATTCATGGTCAATTCCATGATCTGATGAAACTTTTCCAAACCGGGGGTCATGTGCCCGAGACAAATTATATTTTTATGGGAGACTTTGTTGATCGAGGTTACAATAGTCTTGAGGTTTTTACCATCCTTTTACTTCTAAAAGCTAGACAATTAACCCAGGTCTACGGATTTTATGATGAATGCCAGAGGAAGTACGGCAATGCCAATGCATGGCGGTATTGTACAGATGTGTTTGACTATCTAACACTTTCTGCAATTATTGATGGAACTGTGCTTTGTGTTCATGGTGGCCTTTCTCCTGACATTCGCTCAATTGATCAGATAAGGATCATTGATCGGAACTGTGAAATTCCTCACGAGGGTCCTTTCTGTGATCTAATGTGGAGTGATCCTGAAGATATTGAAACATGGGCAGTAAGTCCCCGTGGTGCAGGTTGGCTATTTGGATCTAGAGTCACGTCTGAGTTCAATCACATAAATAATCTTGATCTTGTTTGTCGAGCACATCAACTTGTTCAAGAAGGCCTCAAGTATATGTTCCCAGATAAAGGCCTTGTAACTGTATGGTCTGCACCTAATTACTGTTACCGATGTGGAAATGTAGCTTCTATTCTGAGTTTCAATGAAAATATGGAAAGAGAAGTTAAATTTTTCACTGAAACAGAGGAAAACAATCAGATGAGAGGGCCCAGGACAGGCGTTCCATATTTCTTATAG 867 0.4083 MDLDQWILKVKDGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRSIDQIRIIDRNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFPDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04058 288 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 2 288 IPR047129 GO:0004722
Viun7g04058 288 CDD MPP_PP2A_PP4_PP6 2 270 - -
Viun7g04058 288 SUPERFAMILY Metallo-dependent phosphatases 2 271 IPR029052 -
Viun7g04058 288 Gene3D - 1 288 IPR029052 -
Viun7g04058 288 FunFam Serine/threonine-protein phosphatase 1 288 - -
Viun7g04058 288 SMART pp2a_7 16 272 IPR006186 GO:0016787
Viun7g04058 288 PRINTS Serine/threonine phosphatase family signature 73 100 IPR006186 GO:0016787
Viun7g04058 288 PRINTS Serine/threonine phosphatase family signature 211 231 IPR006186 GO:0016787
Viun7g04058 288 PRINTS Serine/threonine phosphatase family signature 44 71 IPR006186 GO:0016787
Viun7g04058 288 PRINTS Serine/threonine phosphatase family signature 234 250 IPR006186 GO:0016787
Viun7g04058 288 PRINTS Serine/threonine phosphatase family signature 155 182 IPR006186 GO:0016787
Viun7g04058 288 Pfam Calcineurin-like phosphoesterase 44 220 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04058 Viun-Chr7 39784336 39791744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04058 43 206 Calmodulin-binding Proteins AT5G63870 32.870 5.69e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04058 K15498 - gmx:100811943 580.482