Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04008 ATGTTTGTTCCCCTGTTCTGGGAGGCTGTTGAATTCCTCTATATATTGGAGAAAACAGCCGTCATCTCACCATTCTTCCAAAACTTTACAAACAACAAAGTACAACAAATAAATTTCATGATGTTGACACATTGCCATGAACTGTGCAAGCCAGTCTCCATCATGATTCTAGTTAACTTGGCTCTGGCTTTTGTCAATTTGCTTCTGAAGAAGGTTCTTAATGAAGGAATGGACTACATGGCCATTATAACATATCGACAGGCAATTTCGTTTATCTTCATGGCACCTATTGCCTTCATCTATGAAAGGAAACACAAAGTGGAAGTTCGCATAATATTTCTCCTTTTCCTCAGTGCCCTACTCGGAGTAACAGTTCCACAAAACCTATTCCTTCTCGGACTTGAATATACGTCAGCCACGTTCTCATGTGCGTTCCTCAACATGGTGCCTGTATTTACGTTCATTATGGCAGTGCCATTTGGGATAGAGAAGGTGAATATGCAAAGCAAGGGAGGAAAAGCTAAAATCGTGGGAACTTTTGTTTGCATTGGTGGAGCCTTGTTGTTGGTCCTTTACAAAGGAATGCCTCTTATCAAGCCAGAATCTCAATACATAGCTGACAAAGTTACAAGTGTACCTTCAACTGCCAAGTTAGGGACGTGGATTATAGGTTCCATAATTTTGACTGTAAGCTGCCTCCTGTGGTCTTCATGGTTCATCATACAAGCAAAGATTAGCAAAAAATACCCATGTCAATATTCCAGCACAGCTATTTTGTCACTTTTCGCTGCCATTCAATCAGCAATGTTAACTCTGATCATCAAGAGAAATAATGCTTCGTGGATTCTCAAAGGAAAGCTAGAAATAATAAGTATTATATATGCTGGACTGGTGGGGTCGGGCTTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGTGGTCCAGTTTTCACCGCAGCTTTTACCCCCCTTATACAGATATTTGTGGCCGTCCTTGATTTCTCTGTACTAAAGGAGGAAATTTATCTGGGAAGTGTTGCAGGATCTGCGTTAGTTATTGCTGGCATGTATATTCTTCTGTGGGGAAAAAGTAAAGAGCAAGGACAAGATGTTCAGAAGGATATGCAAACAAATCAAGATGTAGAACGTCAATAG 1158 0.4059 MFVPLFWEAVEFLYILEKTAVISPFFQNFTNNKVQQINFMMLTHCHELCKPVSIMILVNLALAFVNLLLKKVLNEGMDYMAIITYRQAISFIFMAPIAFIYERKHKVEVRIIFLLFLSALLGVTVPQNLFLLGLEYTSATFSCAFLNMVPVFTFIMAVPFGIEKVNMQSKGGKAKIVGTFVCIGGALLLVLYKGMPLIKPESQYIADKVTSVPSTAKLGTWIIGSIILTVSCLLWSSWFIIQAKISKKYPCQYSSTAILSLFAAIQSAMLTLIIKRNNASWILKGKLEIISIIYAGLVGSGLCYVAMSWCVKQSGPVFTAAFTPLIQIFVAVLDFSVLKEEIYLGSVAGSALVIAGMYILLWGKSKEQGQDVQKDMQTNQDVERQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04008 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 286 366 - -
Viun7g04008 385 Pfam EamA-like transporter family 223 361 IPR000620 GO:0016020
Viun7g04008 385 Pfam EamA-like transporter family 53 190 IPR000620 GO:0016020
Viun7g04008 385 PANTHER WAT1-RELATED PROTEIN 51 376 IPR030184 GO:0016020|GO:0022857
Viun7g04008 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 85 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04008 Viun-Chr7 39573683 39577175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g04008 47 295 Nodulin-like Gene Family AT3G30340 45.418 3.68e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04008 - - vun:114189567 748.814