Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04005 ATGTTAGAGGGGAGTTCGTTGGAGAAGGGCGGCGCTGGAGACGAAAACCGTGGTGAAAATGGTGGAGTTGAAGTTTCTACTTCGGTTCAAGGTGTTAAAAAGAAGCGAGGCAGAAAGAGTAAACAGGAAAAGTATGAGATGGAAATGAAGTTGTTGGGGGAAAATTTATTGGAGAAAAATGGTGAAAATAGCAGGGTAGGATGTTCTTCTGTTCAAGGTGCGGAAAAGAAGCGCGGCAGAAGGATTAAAAAAGAAAATGAAGACATGGACAGTAAGATTTCAGATGGCAGTTTGTTGGAGAAGAATGGTGATGGAGATGTTAGCCACGGTGAAAGGGATGGGGTTGGTGGTTCTTCTTCTCTTCAAGAAGGCGTGAGAGATGGAGGTAATGGTGGGGTTCATGTTAAGAGACCTGGGAGGAAAAGAAAGGTTGTTAAGGAAGGGGATGCTGAGTTTGAAATGTCTGTCGTTCTTTCGGGAAGTGGAAGTGGCAATGGGAAACAACATAATCTTAGAACTCGTAAAGTAAAAATAGAAGCTGTGAAGCCGGAAAAGAGTAAGAGGGATAAGAAGTCTGTTGAACAATCCTTAATGTGCCATCAATGCCAGAGAAATGATAAAGGCAGGGTTGTGAGGTGCTCAAAATGCAAGAGGAAAAGATTTTGCATACCCTGTATTCTAAATTGGTATCCTCATTTGAAAGAGGATTACATTGCAGAGGCATGTCCCGTGTGCCGTGGTAATTGCAACTGCAAAGCATGCTTGCGATCCGATGTACTTATTAAAGAAATGAAGAATAAAACAAGTACCAATGAAAATGAGAAGGTTGAGGTCTCTACGTGTTTGCTGCAAGTACTTCTTCCGTATTTAAGATTGTTGGATGAAGAACAAATGATTGAGAACGAGACAGAAGCTAAGATACAGGGAATCTCAGTCTCAGAGCTTAAAGTAGTGCACGCGGATTATTGTAAGGATGAACGTGTATATTGTGACAACTGCAAAACCTCCATATTTGATTACCATAGAAGCTGTACAGAATGCTCTTTTGATCTTTGTCTCATCTGTTGCCGTGAACTTCGTAGTGGTCAGCTTGTAGGGGGTGCAGATCCAATTATGTTGGAGTTTTCATTCAGAGGTCGTGAGTACTTGCATGGTGGAGAGGAAACAGTAAACCAAACTGAATTAAATGATGCTGCTAAGCCTCTAATTCGTGAATGGTCAAGAGCTGGATGGCATGCAGAAAGTAATGGTAGCATTCCTTGTCCAAAAGCCAGTGATAAATGTTGCCATGGTTTTCTTGAACTGAGAAGTGTATTAGGTCAACATTTTATAACTGATTTATTGTGTAAAGCAAATGGACTGGCACAAACATTCAAGCATGGGACCCCTGACAAAATCTGTTTGTGTTCAAGGCCTGATAGAAACGCAAATTATGATATGAGGAAGGCTGCTTCCCGTGCAGATTCTAGTGACAACTATTTGTACTGTCCTAAGGCTGTACAACTACAGGATGAGGATTTAGGGCATTTTCAGTGGCATTGGGAAAAGGGAGAGCCTGTCATTGTTAGCCATGTGATTGATTGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTCAGATGACTAATACCAAACATGAACAACATTTAGATGTAAAGGCAATTGATTGCTTAGATTTCTGCGAGGTAGAAATTAACATCCACCAATTCTTTATTGGGTATACGAAAGCTTTTGGGGATTGGCTTAATTGGCCTCGGATATTGAAGTTAAAAGATTGGCCACCTTCTAATTTATTTGAGGAACGCTTGCCTAGACATTGTGCTGAGTTTATATCGTCCTTACCATTCAAGGAATATACTGATCCTCTTGGTGGCTGTCTTAACTTAGCTGTTAAATTACCTAAGGAGTGTCTAAAGCCAGACATGGGGCCAAAGACATATATTGCTTATGGATTTCCTGAGGAGTTTGGACGTGGTGACTCAGTGACTAAGCTCCACTGTGATATGTCCGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTCAAATTGGAACCCGGGCATCTTAGTGCCATTGAGAAGTTGAAACAAAAGCACTTTGAGCAAGACAAGAGGGAGCTGCATAGTGATCACGATAGAGAAACTAATGTTGACAAAGTAAAAACGATGCCAGAAAGTGATTTGTCGTTTGCAGGGGATGGCTCAGAAGGTGCTCTGTGGGATATTTTTCGGAGGCAGGATGTACCTAAATTGCAGGAGTATCTGTGGAAGCATTTTAGAGAGTTTAGGCATATCCATTGCCGTCCTTTGGAGCAGGTTATTCACCCCATCCATGACCAGACATTCTATTTGACCGTGGAGCATAAGAGGAAGCTTAAGGAAGAGTATGGAATTGAGCCCTGGACATTCGTTCAGAAGCTTGGAGATGCTGTTTTCATTCCAGCTGGCTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATTAAGGTTGCATTGGATTTTGTTTCTCCTGAAAATGTTGGGGAGTGTTTTCGTTTAACAGAGGAATTTCGTACACTTCCCATAAGCCATGGGTCTGCTGAGGATAAATTGGAGGTGAAAAAGATGACAATATATGCTATGCAAGATGTGATAACAAAATTGGAGAAAGCAAGGATGGAAGTAAATATTCCCTTAACAGACAAAGAGGAAGAGGTGGAAGAATAA 2721 0.4164 MLEGSSLEKGGAGDENRGENGGVEVSTSVQGVKKKRGRKSKQEKYEMEMKLLGENLLEKNGENSRVGCSSVQGAEKKRGRRIKKENEDMDSKISDGSLLEKNGDGDVSHGERDGVGGSSSLQEGVRDGGNGGVHVKRPGRKRKVVKEGDAEFEMSVVLSGSGSGNGKQHNLRTRKVKIEAVKPEKSKRDKKSVEQSLMCHQCQRNDKGRVVRCSKCKRKRFCIPCILNWYPHLKEDYIAEACPVCRGNCNCKACLRSDVLIKEMKNKTSTNENEKVEVSTCLLQVLLPYLRLLDEEQMIENETEAKIQGISVSELKVVHADYCKDERVYCDNCKTSIFDYHRSCTECSFDLCLICCRELRSGQLVGGADPIMLEFSFRGREYLHGGEETVNQTELNDAAKPLIREWSRAGWHAESNGSIPCPKASDKCCHGFLELRSVLGQHFITDLLCKANGLAQTFKHGTPDKICLCSRPDRNANYDMRKAASRADSSDNYLYCPKAVQLQDEDLGHFQWHWEKGEPVIVSHVIDCTSGLSWEPLVMWRAFRQMTNTKHEQHLDVKAIDCLDFCEVEINIHQFFIGYTKAFGDWLNWPRILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTDPLGGCLNLAVKLPKECLKPDMGPKTYIAYGFPEEFGRGDSVTKLHCDMSDAVNVLTHIAEVKLEPGHLSAIEKLKQKHFEQDKRELHSDHDRETNVDKVKTMPESDLSFAGDGSEGALWDIFRRQDVPKLQEYLWKHFREFRHIHCRPLEQVIHPIHDQTFYLTVEHKRKLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPISHGSAEDKLEVKKMTIYAMQDVITKLEKARMEVNIPLTDKEEEVEE 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04005 906 SMART cupin_9 608 856 IPR003347 -
Viun7g04005 906 MobiDBLite consensus disorder prediction 41 55 - -
Viun7g04005 906 SUPERFAMILY Clavaminate synthase-like 509 877 - -
Viun7g04005 906 Gene3D Cupin 492 864 - -
Viun7g04005 906 MobiDBLite consensus disorder prediction 74 111 - -
Viun7g04005 906 Pfam JmjC domain, hydroxylase 743 839 IPR003347 -
Viun7g04005 906 ProSiteProfiles Zinc finger RING-type profile. 199 246 IPR001841 -
Viun7g04005 906 MobiDBLite consensus disorder prediction 1 146 - -
Viun7g04005 906 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 34 891 IPR045109 GO:0032454|GO:0033169
Viun7g04005 906 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 194 259 IPR018866 -
Viun7g04005 906 FunFam Transcription factor jumonji domain-containing protein 491 865 - -
Viun7g04005 906 ProSiteProfiles JmjC domain profile. 627 856 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g04005 Viun-Chr7 39557741 39565456 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Viun7g04005 JmjC 1.4e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04005 K15601 - gmx:112997634 1170.61