Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03900 ATGGGTGTGGGAATATCATTTCTCATAGCGCTGAAAGCAACAACGCTCTTCCTATTCTTCGCGTACCTGAAGAATCTCGGTTTCACTCTCTTCTCCCTACCTTTTCTCTACGCTTCGCTCATCTCATTCTTGGTCTCAATCGCCTCTCACCCTTCCATCGATCTTCCCATGCTTCTCGGAAAAACCACCGACGGAAGTTTCCCTCTTTTTTCACTGATAATTTTCGGCCCTTACATCTACTTCGTTCGCGTTTTCTCTATGCTCCGAAGACTTCGAAGCGGAGAACCTCCTTACACACAGGTTCACGACTATCTCTATGTCGGTGGCTGGCCATCCTCGCCTCACATGCTGCCACCTGGCGACCCTGCCATCATCGATTGCACGTGCGAGTTCCCGCGTGTCAAGGACTTCACTGTGGGGTTGCCCTATCGCTGCATTCCGACGTGGGACACGAGGTCGCCTCAACCTGCTGATATTGAATCTGCTGTTAAATGGGCCTCTCGACAGAGAGACCTCAACAGGCCCATTTTCGTTCACTGTGCTTATGGTCATGGAAGAAGTGTAGCAGTTATGTGTGCACTGTTAGTAGCACTAGGCATCACAGAGGATTGGAAGACTGCTGAGAAACTGATCAAGCAAAAACGACCTTACATTCGAATGAATGCTCTCCATCGCAAGGCCCTTGAAGAATGGTCCAGACACAGATTGTCTGCGCCGAAGAAGTAG 726 0.4986 MGVGISFLIALKATTLFLFFAYLKNLGFTLFSLPFLYASLISFLVSIASHPSIDLPMLLGKTTDGSFPLFSLIIFGPYIYFVRVFSMLRRLRSGEPPYTQVHDYLYVGGWPSSPHMLPPGDPAIIDCTCEFPRVKDFTVGLPYRCIPTWDTRSPQPADIESAVKWASRQRDLNRPIFVHCAYGHGRSVAVMCALLVALGITEDWKTAEKLIKQKRPYIRMNALHRKALEEWSRHRLSAPKK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03900 241 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 157 226 IPR000387 GO:0016311|GO:0016791
Viun7g03900 241 Pfam Dual specificity phosphatase, catalytic domain 124 233 IPR000340 GO:0008138|GO:0016311
Viun7g03900 241 Gene3D Protein tyrosine phosphatase superfamily 98 236 IPR029021 -
Viun7g03900 241 PANTHER - 3 240 - -
Viun7g03900 241 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 81 236 IPR029021 -
Viun7g03900 241 SMART dsp_5 97 234 IPR020422 GO:0006470|GO:0008138
Viun7g03900 241 CDD DSP_bac 94 233 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03900 136 233 Protein tyrosine phosphatase (PTP) family AT5G56610 31.000 7.23e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03900 - - gmx:100804705 462.611