Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03824 ATGGTTGCAGTGATTTACCGGAAGTTATACAGTAACAACTACGATTACTTTCTGAGTTTGCCGCCGCATAAACTCGACAAAAATAGACTTTTAAACTGGTTTGATCTTAGGTTCAATGTAATAACAATATTGTTGGATGTTGACTCAGTCAGAAACGGCTGCATGCCAAAGTCGGTGGTTGAAAATAACACATCATTTGGTTGTTTTTCTTTGCTTGTCTCTTGCGAACATTTCCGTGATGACCTCTGTTTCCTCTGTTCTTCACGACTTTTCTTTGAGGAGGCCATTACAAAGCACTCTCGAGAAAGAAGGAACCCGAAGATGGCTGCACTTCATGTGTTTGGTGTCGTTTTGATGGCATGGCTAGTACAAGCAGTATTGGGTGGCAGCTGTCCTTCCTTGATTAACTGCGGCGATCTCGGTAACATCAGTTTTCCTTTCACCGACACGCGTCACCGAGACTGTGGAATATTGGTGATACATGGCTGTGATGACCACGAACCAGGGGCCAAAAAAACCATAAAAAACAACAATAAATGGTTTGATATTCTGAAGCTAGAGCAGTTCACGATTACCGTGCAACACGATGAACTCCGAGACTTTTTGCTACAACGAAGTTGTGAAGCCTTCAATCAGAACTATACTTTCACTGTGAGCTCGCCTTTGGCTAAGACTTCTCCTTTAAATCATTACGTAGACGTACTCCGATGTAACCCCGCCCTCGGTGCTGCACCAAACAATTCTGTTTCTAACTCCGCAATTTGCAGAAACGAAACAATATATTCAGTGGTGGACAACGACCCTTCTTCCAGCTACACTCATCTCAAAGGATGTACAATGGTTCAGCTTCCTACGAACTTGGACGTTCGGTTTGTGGATCTTGATCCCAATGATCCTTTCAAGTACGTTACATTCGAAATCGAAATTGGAATAGAATTGTCTCAGAACTGTTCTAGGTGTCTGTATGCTAATGGAGGCCAATGTCGAGTTGACAACACCGGAATGTTTTACTGTGACCAAGGAAAGGGACCAACAAAAACTCGTCTTATAGTGATAGCAGTTGCATGCGTGAGTGGAGCACTCGGAGTTATAGTTTTGGGTGGCTGGCGCATTAGAAGACGCTTTTACAACAAGAAAAACCCCAGCCACCAGATCATTGAGATATTTCTGAACACCCACGGTCATCTTGCAGCCAAAAGATACAGTTATTCAGAGATAAAGAAGGCCACCAACTCCTTCAGAAACAAATTGGGTGCAGGAGGCTATGGTAGCGTCTACAAGGGCAAATTAAACGATGGAAGCCTTGTGGCAGTGAAAGTCTTAAACGACTCCAAAGGTAACGGTGAGGAATTCATCAACGAGGTTGCCAGCATCAGTGTCACTTCTCATGTTAACATTGTTAGTTTACTAGGATTCTGTCAGGAAGGTTCTAAAAGAGCTCTAATATATAAATACATGCCTAATGGATCCCTTGAGAAGTTCATATATGAAGACAAGGATCCACGCAAGCTTAGCCTTCGATTAAGCTGCAAAACCATCTACAATATTGCGATTGGCATTGCTCGAGGATTAGAGTATTTACACAGAGGATGCAACACTAAAATCTTGCATTTTGATATAAAGCCTCACAATATATTGGTTGATGAGGATTTCTGTCCTAAGATTTCAGATTTTGGATTGGCTAAGATATGTCAGAAAAAGGAAAGTATTGTGTCCTTATTGGGAACTAGGGGAACTGCAGGATACATTGCTCCTGAGGTATTTTCTAGAAATTTTGGAGGTGTTTCTCATAAATCTGATGTATATAGCTATGGAATGGTTGTTTTGGAAATGGTGGGGGCAAAGATGAATAAGAATGTTGAAGGTGAAGGTTCAAGTGAAGTATATTTTCCACAGTGGGTTTACAAGCGTCTTGAGCTGAATGAGGAGCCTAGACTGCGAAGCATAAAAAATGAAAGTGATAGAGAAATGATACGAAAGTTGATTATTGTGAGCTTGTGGTGCATTCAGACAGACCCATCAAATAGGCCAGCAATGAGTAGAGTGGTAGATATGATGGAAGGAAGCTTGGAGGTGTTGCAAATACCACCAAAACCTTATCTCTCTTCACCTCCAAGATCTCCTCCTAGTTCCTCTGATCACACCAACTGCACGTCTCACACTACATATCCTTCTGAGTACTGA 2184 0.4199 MVAVIYRKLYSNNYDYFLSLPPHKLDKNRLLNWFDLRFNVITILLDVDSVRNGCMPKSVVENNTSFGCFSLLVSCEHFRDDLCFLCSSRLFFEEAITKHSRERRNPKMAALHVFGVVLMAWLVQAVLGGSCPSLINCGDLGNISFPFTDTRHRDCGILVIHGCDDHEPGAKKTIKNNNKWFDILKLEQFTITVQHDELRDFLLQRSCEAFNQNYTFTVSSPLAKTSPLNHYVDVLRCNPALGAAPNNSVSNSAICRNETIYSVVDNDPSSSYTHLKGCTMVQLPTNLDVRFVDLDPNDPFKYVTFEIEIGIELSQNCSRCLYANGGQCRVDNTGMFYCDQGKGPTKTRLIVIAVACVSGALGVIVLGGWRIRRRFYNKKNPSHQIIEIFLNTHGHLAAKRYSYSEIKKATNSFRNKLGAGGYGSVYKGKLNDGSLVAVKVLNDSKGNGEEFINEVASISVTSHVNIVSLLGFCQEGSKRALIYKYMPNGSLEKFIYEDKDPRKLSLRLSCKTIYNIAIGIARGLEYLHRGCNTKILHFDIKPHNILVDEDFCPKISDFGLAKICQKKESIVSLLGTRGTAGYIAPEVFSRNFGGVSHKSDVYSYGMVVLEMVGAKMNKNVEGEGSSEVYFPQWVYKRLELNEEPRLRSIKNESDREMIRKLIIVSLWCIQTDPSNRPAMSRVVDMMEGSLEVLQIPPKPYLSSPPRSPPSSSDHTNCTSHTTYPSEY 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03824 727 Gene3D Phosphorylase Kinase; domain 1 390 485 - -
Viun7g03824 727 MobiDBLite consensus disorder prediction 707 727 - -
Viun7g03824 727 FunFam serine/threonine-protein kinase PBS1-like 384 485 - -
Viun7g03824 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Viun7g03824 727 ProSitePatterns Protein kinases ATP-binding region signature. 417 439 IPR017441 GO:0005524
Viun7g03824 727 Pfam Protein kinase domain 415 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03824 727 SUPERFAMILY Protein kinase-like (PK-like) 393 686 IPR011009 -
Viun7g03824 727 FunFam PR5-like receptor kinase 486 698 - -
Viun7g03824 727 ProSiteProfiles Protein kinase domain profile. 411 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03824 727 Gene3D Transferase(Phosphotransferase) domain 1 486 694 - -
Viun7g03824 727 MobiDBLite consensus disorder prediction 696 727 - -
Viun7g03824 727 SMART serkin_6 411 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03824 727 PANTHER RUST RESISTANCE KINASE LR10-RELATED 383 708 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03824 Viun-Chr7 38322994 38327329 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03824 297 716 Receptor kinase-like Gene Family AT5G38260 49.652 2.30e-129 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun7g03824 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03824 - - vun:114191483 1467.21