Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03821 TCCACCTTGGTAGTTGCTGGAGCCGTAGTTTTGGTGATGGTCCTGGCTTGCTGCTTCAGGACAAATATCATCTCTGCCAATACTCTTTTGTTTCCGAGGGATCCAACCCATCAGATTATTGAGGGGTTTCTGAAGGAGCATGGACCCCTTCCTACAGCCAGGTATAGTTATTCGGAGGTTAAGAAAATGACAAACTTTTTCAGAAACAAATTAGGCCAAGGGGGATTCGGTAGTGTATATAAGGGGAAGTTACACGACAGACATGTTGCGGTGAAGATTTTAAATAGATCAGAAGACAATGGAGAAGAAGAATTCATCAATGAAGTGGCAAGTATCAGCAGGACTTCACATGTTAACGTTGTTAGGCTTTTGGGGTTTTGTTTGGATAAGTCTAAACGGGCTCTAATATATGAGTTTATGCCTAATGGATCTCTAGATAAGTTTATATATCATGACAAAAATTCATTGCGGGTTTCTTGCCAATTGGATTACGAAATATTATATGATATTGCAATTGGCATTGCACGTGGGTTAGAGTACTTACACAGAGGTTGCAACACTAGAATTTTGCATTTTGACATAAAACCTCACAACATATTACTAGATGATGAATTCTGCCCAAAAATATCAGATTTTGGACTTGCAAAACTATGTCCAAGAAAAGAAAGTGCTGTATCAATATTTGGTGCAAGAGGAACTGCAGGGTATATTGCTCCAGAAATATTTTCGAGAAACTTTGGTCCAGTGTCGCATAAATCAGACGTCTACAGTTATGGAATGATGGTCATAGAAATGGTTGGAATGAAACATAATTTTAAGGCTAAAGTAGACTGTTCGAGTGAAATATATTTTCCTCAGTGGATTTACAATTTTCTTGAATCAGAGCAGGAGCTTAGTTTAGAGAATATGATAGATGAAAGTGATGACAAAATAGTGAGAAAAATGTCAATAGTAGGTTTATGGTGCATCCAAACCTATCCTTCAACTCGTCCAGCCATAAGTAGAGTAGTGGAAATGTTAGAAAGTAAAGTTGAGTTATTGCAAATTCCACCCAAACCATTTTTATCAGATCCTTCAACTTCTTCAGTCAACTTGTCAGGTCAGACATTATAA 1113 0.3765 STLVVAGAVVLVMVLACCFRTNIISANTLLFPRDPTHQIIEGFLKEHGPLPTARYSYSEVKKMTNFFRNKLGQGGFGSVYKGKLHDRHVAVKILNRSEDNGEEEFINEVASISRTSHVNVVRLLGFCLDKSKRALIYEFMPNGSLDKFIYHDKNSLRVSCQLDYEILYDIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDDEFCPKISDFGLAKLCPRKESAVSIFGARGTAGYIAPEIFSRNFGPVSHKSDVYSYGMMVIEMVGMKHNFKAKVDCSSEIYFPQWIYNFLESEQELSLENMIDESDDKIVRKMSIVGLWCIQTYPSTRPAISRVVEMLESKVELLQIPPKPFLSDPSTSSVNLSGQTL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03821 370 PANTHER RUST RESISTANCE KINASE LR10-RELATED 37 357 IPR045874 GO:0004672
Viun7g03821 370 SUPERFAMILY Protein kinase-like (PK-like) 49 341 IPR011009 -
Viun7g03821 370 Gene3D Transferase(Phosphotransferase) domain 1 140 348 - -
Viun7g03821 370 ProSiteProfiles Protein kinase domain profile. 65 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03821 370 FunFam PR5-like receptor kinase 140 352 - -
Viun7g03821 370 Gene3D Phosphorylase Kinase; domain 1 52 139 - -
Viun7g03821 370 ProSitePatterns Protein kinases ATP-binding region signature. 71 92 IPR017441 GO:0005524
Viun7g03821 370 SMART serkin_6 65 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03821 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Viun7g03821 370 Pfam Protein kinase domain 69 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03821 370 FunFam serine/threonine-protein kinase PBS1-like 41 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03821 Viun-Chr7 38313681 38314842 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03821 54 358 Receptor kinase-like Gene Family AT5G38280 60.645 6.09e-127 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun7g03821 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03821 - - gmx:100778621 582.022