Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03819 ATGGTTGTGGTGCTTCTATTGTATCATATGAAAATGAAAATGTACGATGTTTATGTAATCCTTTTGTTTTGTCATCTGACAGTGTTGCATCTCTCAGCTGGGAATGCAAATGAGCACACTTCTGATTGTCCGGACTTATTTGATTGCGGAAGTTTGGGGAATATTTCCTTTCCCTTCACCACCTCTGAACACCCCAATTGTGGTGCTTTGGCAATCCAAGGCTGTAATAATCCTAACCAAACAGCACTGAAGCAAGTCCGGTTGAGCAGTGGAGGAAAACTTTTACAAGTTACAAACATTGTTGGTGGTTGGAGATGGAAAATTTCCATTATAGACAAGGATTACCGCAATCTTCTTGAAAATTCTAGTTGTAATGCCTTGAGCTATAATATCACCGTCCCTCCCTCCTCCCCTTTCGGTTATTTTTCCCTGGAAAACAATATAACCGCCCTCAATTGCAGCCACCACAAAAACCTCAACCTTTCAAAAGATTTCATCAACTATACTCGATGTTCTCCCTTTGATTTTTACTTCGCCCCTTCATCCTCTGATCAGAACTACCTACGCTCTTTAACCTCTTCATGTTCAATGGTTCAACTTCCCGTCAGACAAGATTCCCAGTTCTTCAAAGACCCCTTTGGATTTTTAAATCCTCAAATTACCTTTCAATTCCAGTCTTCAAGTGCCTGTTGGCGGTGTCGGGATAGAGGGGGCAATTGCCGACTAGACAGCAACGCAAAATTATATTGCGCCATGAGGAAAAGTGGAGCTTGGAATCGGAAGCTTCCGTTGATGCTAGCTTTGACCGTGGTGGCTTCTGTAGTTGTAGTGCTGATGGTTTTGATTTGTTGCTTCAGAGCAAAGATCTTTTATCCTTTGTTTTGGAGGGAAAATCCAACTCATCGCGTTATTGAAGACATTTTGAAGGAACACGGACCCCTTCCCACAGCCAGGTTCAGTTATTTAGAGGTTAAGAAAATGACCAACTCTTTCAGAAACAAATTAGGGCAAGGGGGATTCGGTAGCGTATACAAAGGGAAATTACATGATGGATGTGTTGTTGCAGTGAAAGTTTTAACTGTATCTAAAGGCAATGGAGAAGAATTCATCAATGAAGTTGTGAGTATTAGCAGGACTTCACATGTTAATATCATTAGACTTTTAGGATTTTGTTTTGAGAATACTCACCGCGCTCTAGTATACGAGTTTATGCCTAACGGATCTCTTGACAAGTTCATCTATGAAGACAAAATTGCATCAAAGGATGTTCATCAACTGGATTGGAAAATATTGAATGATATTGCAGCTGGCATAGCTCGTGGATTAGAGTACTTATATAGAGGCTGTAACACTAGAATTGTACATTTTGACATAAAACCTCACAACATATTACTAGACGAGGATTTCTGTCCAAAAATTGCAGATTTTGGACTTGCAAAAGTATGTCCTAGAAAAGAAAGTATGGTATCCCTATTTGGTGCCAGAGGAACTGCAGGGTATATTGCTCCAGAAGTTTTTTCCAGAAACTTTGGTGCTGTGTCACACAAGTCAGATGTTTACAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAAAAGAAAGAATATTAAGACAAAAGTAGACCGGTCGAGTGAAATATACTTTCCCCATTGGATTTATAATCGTCTTGAATCAAATACAGAGCTTGGTTTAGAAAATGTGAGAAATGAAAGTGAGGACGAAATGGTGAGAAAGATGACAATAGTGGGCTTGTGGTGCATACAAACTCATCCATCAACTCGACCGACCATAAGTAAAGTGGTGGAAATGTTAGAAAGTAAACTTGATTTTTTGCAAATTCCACCTAAACCATATTTGTCTTCTCCTCCAATATCTCCGACTAAGTTGTCATATGAAAGTTTATAA 1905 0.3942 MVVVLLLYHMKMKMYDVYVILLFCHLTVLHLSAGNANEHTSDCPDLFDCGSLGNISFPFTTSEHPNCGALAIQGCNNPNQTALKQVRLSSGGKLLQVTNIVGGWRWKISIIDKDYRNLLENSSCNALSYNITVPPSSPFGYFSLENNITALNCSHHKNLNLSKDFINYTRCSPFDFYFAPSSSDQNYLRSLTSSCSMVQLPVRQDSQFFKDPFGFLNPQITFQFQSSSACWRCRDRGGNCRLDSNAKLYCAMRKSGAWNRKLPLMLALTVVASVVVVLMVLICCFRAKIFYPLFWRENPTHRVIEDILKEHGPLPTARFSYLEVKKMTNSFRNKLGQGGFGSVYKGKLHDGCVVAVKVLTVSKGNGEEFINEVVSISRTSHVNIIRLLGFCFENTHRALVYEFMPNGSLDKFIYEDKIASKDVHQLDWKILNDIAAGIARGLEYLYRGCNTRIVHFDIKPHNILLDEDFCPKIADFGLAKVCPRKESMVSLFGARGTAGYIAPEVFSRNFGAVSHKSDVYSYGMMVLEMVGKRKNIKTKVDRSSEIYFPHWIYNRLESNTELGLENVRNESEDEMVRKMTIVGLWCIQTHPSTRPTISKVVEMLESKLDFLQIPPKPYLSSPPISPTKLSYESL 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03819 634 SMART serkin_6 329 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03819 634 FunFam S-receptor-like serine/threonine-protein kinase 301 403 - -
Viun7g03819 634 Pfam Protein kinase domain 333 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03819 634 Gene3D Transferase(Phosphotransferase) domain 1 404 617 - -
Viun7g03819 634 PANTHER RUST RESISTANCE KINASE LR10-RELATED 301 621 IPR045874 GO:0004672
Viun7g03819 634 SUPERFAMILY Protein kinase-like (PK-like) 311 605 IPR011009 -
Viun7g03819 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Viun7g03819 634 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Viun7g03819 634 Gene3D Phosphorylase Kinase; domain 1 307 403 - -
Viun7g03819 634 FunFam PR5-like receptor kinase 404 616 - -
Viun7g03819 634 ProSiteProfiles Protein kinase domain profile. 329 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03819 Viun-Chr7 38303867 38307159 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03819 318 620 Receptor kinase-like Gene Family AT4G18250 59.807 2.69e-125 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun7g03819 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03819 - - pvu:PHAVU_007G030300g 699.508