Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03815 ATGAGTTCGGTTCATGAATTTGTATTACTGCTTCTGTTTTGTAAGTTTATGCCACTTCTCTTGGCGGCCGGAGACCAAGGAAGGTGTCCACCTTCATTTCATTGTGGATATCTTGGCAATATCAGTTTCCCTTTTACTATAACTGGACGCCACGACTGTGGTTTCTTGTCCATAGGAAATTGTGATGATCAGGATCCACATACGCCCAAATTTATCCAATTACAAGCAAATGAAAATTGGGTTCAGGTTGTAGCCATATCTCAGCTTCTTAGTAGCCCTACTACCCGTTTCGCAACTTTTCAATTCAGAGATGAACATTTCTATGACCTTCTGCAGAACCGGAGTTGTAAAGCTTTTGTAAACAGTTATACTTTTCCTCTTATTTCTCACTTTGCTGCTTTTAGATTGCCACACAACGCAACTCTGCTCTTGTGCGACAAGACCCTCAATGCCAGAAATATAAATATGAGCAAGTATAATGGGTGCCTTGGCTACGATCTCTACTACAACCACTTCACTACAGATGATGATGCGTCTCCGAGTTCTTTTACAGCGTGTAAAAAGGTCCTGCTTCCAATTAAAGACTTGCCTGACGCCAATGACCCTTTTACTTTCGTAACTGGGGATGTCACCATTAACGTAGAATTAACAGATCAATGTTCAGATTGCCACTATCGCAAAGAAGGGCAGTGTCAACTTGACAGCAGAGAGCAATTTTCTTGTGCCAACAGTTACGAGGAAACCAGAAAGATGTCGAAAGTGGCAACAGCTTTGACCGTGGTGGCTTCTGTAGTTGTAGTGCTGATGGTTTTGATTTGTTGCTTCAGAGCAAAGATCTTTTATCCTTTGTTTTGGAGGGAAAATCCAACTCATCGCGTTATTGAAGACATTTTGAAGGAACACGGACCCCTTCCCACAGCCAGGTTCAGTTATTTAGAGGTTAAGAAAATGACCAACTCTTTCAGAAACAAATTAGGGCAAGGGGGATTCGGTAGCGTATACAAAGGGAAATTACATGATGGATGTGTTGTTGCAGTGAAAGTTTTAACTGTATCTAAAGGCAATGGAGAAGAATTCATCAATGAAGTTGTGAGTATTAGCAGGACTTCACATGTTAATATCATTAGACTTTTAGGATTTTGTTTTGAGAATACTCACCGCGCTCTAGTATACGAGTTTATGCCTAACGGATCTCTTGACAAGTTCATCTATGAAGACAAAATTGCATCAAAGGATGTTCATCAACTGGATTGGAAAATATTGAATGATATTGCAGCTGGCATAGCTCGTGGATTAGAGTACTTATATAGAGGCTGTAACACTAGAATTGTACATTTTGACATAAAACCTCACAACATATTACTAGACGAGGATTTCTGTCCAAAAATTGCAGATTTTGGACTTGCAAAAGTATGTCCTAGAAAAGAAAGTATGGTATCCCTATTTGGTGCCAGAGGAACTGCAGGGTATATTGCTCCAGAAGTTTTTTCCAGAAACTTTGGTGCTGTGTCACACAAGTCAGATGTTTACAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAAAAGAAAGAATATTAAGACAAAAGTAGACCGGTCGAGTGAAATATACTTTCCCCATTGGATTTATAATCGTCTTGAATCAAATACAGAGCTTGGTTTAGAAAATGTGAGAAATGAAAGTGAGGACGAAATGGTGAGAAAGATGACAATAGTGGGCTTGTGGTGCATACAAACTCATCCATCAACTCGACCGACCATAAGTAAAGTGGTGGAAATGTTAGAAAGTAAACTTGATTTTTTGCAAATTCCACCTAAACCATATTTGTCTTCTCCTCCAATATCTCCGACTAAGTTGTCATATGAAAGTTTATAA 1875 0.3925 MSSVHEFVLLLLFCKFMPLLLAAGDQGRCPPSFHCGYLGNISFPFTITGRHDCGFLSIGNCDDQDPHTPKFIQLQANENWVQVVAISQLLSSPTTRFATFQFRDEHFYDLLQNRSCKAFVNSYTFPLISHFAAFRLPHNATLLLCDKTLNARNINMSKYNGCLGYDLYYNHFTTDDDASPSSFTACKKVLLPIKDLPDANDPFTFVTGDVTINVELTDQCSDCHYRKEGQCQLDSREQFSCANSYEETRKMSKVATALTVVASVVVVLMVLICCFRAKIFYPLFWRENPTHRVIEDILKEHGPLPTARFSYLEVKKMTNSFRNKLGQGGFGSVYKGKLHDGCVVAVKVLTVSKGNGEEFINEVVSISRTSHVNIIRLLGFCFENTHRALVYEFMPNGSLDKFIYEDKIASKDVHQLDWKILNDIAAGIARGLEYLYRGCNTRIVHFDIKPHNILLDEDFCPKIADFGLAKVCPRKESMVSLFGARGTAGYIAPEVFSRNFGAVSHKSDVYSYGMMVLEMVGKRKNIKTKVDRSSEIYFPHWIYNRLESNTELGLENVRNESEDEMVRKMTIVGLWCIQTHPSTRPTISKVVEMLESKLDFLQIPPKPYLSSPPISPTKLSYESL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03815 624 Pfam Protein kinase domain 323 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03815 624 PANTHER RUST RESISTANCE KINASE LR10-RELATED 291 611 IPR045874 GO:0004672
Viun7g03815 624 SMART serkin_6 319 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03815 624 ProSiteProfiles Protein kinase domain profile. 319 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03815 624 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Viun7g03815 624 Gene3D Phosphorylase Kinase; domain 1 297 393 - -
Viun7g03815 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Viun7g03815 624 SUPERFAMILY Protein kinase-like (PK-like) 301 595 IPR011009 -
Viun7g03815 624 FunFam PR5-like receptor kinase 394 606 - -
Viun7g03815 624 FunFam S-receptor-like serine/threonine-protein kinase 291 393 - -
Viun7g03815 624 Gene3D Transferase(Phosphotransferase) domain 1 394 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03815 Viun-Chr7 38275969 38278481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03815 2 615 Receptor kinase-like Gene Family AT1G66910 37.942 1.38e-128 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun7g03815 Pkinase 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03815 - - pvu:PHAVU_007G030300g 936.791