Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03797 ATGGTTGTGGTGCTTCCATTGTATCATATGAAAATGAAAATGTACGATGTTTATGTAATCCTTTTGTTTTGTCATCTGACAGTGTTGCATCTCTCAGCTGGGAATGCAAATGAGCACACTTCTGATTGTCCGGACTCATTTGATTGCGGAAGTTTGGGGAATATTTCCTTTCCCTTCACCACCTCTGAACACCCCAATTGTGGTGCTTTGGCAATCCAAGGCTGTAATAATCCTAACCAAACAGCACTGAAGCAAGTCCGGTTGAGCAGTGGAGGAAAACTTTTACAAGTTACAAACATTGTTGGTGGTTGGAGATGGAAAATTTCCATTATAGACAAGGATTACCGCAATCTTCTTGAAAATTCTAGTTGTAATGCCTTGAGCTATAATATCACCGTCCCTCCCTCCTCCCCTTTCGGTTGTTTTTACCTGGAAAACAATATAACCGCCCTCAATTGCAGCCACCACAAAAACCTCAACCTTTCAAATGATTTCATCAACTATACTGGATGTTCTCCCTTTGATTTTTACTTCGCCCCTTCATCCTCTGATCAGAACTACCTACGCTCTTTAACCTCTTCATGTTCAATGGTTCAACTTCCCGTCAGACAAGATTCCCAGTTCTTCAAAGACCCCTTTGGATTTTTAAATCCTCAAATTACCTTTCAATTCCAGTTTTCAAGTGCCTGTCGGCGGTGTCGGGAAAAATGGGGCAATTGCCGACTAGACAGCAACGCAAAATTATATTGCGCCATGAGGAAAAGTGGAGCTTGGAATCGGAAGCTTCCGTTGATGCTAGGAATCGGTCTTGGACCATGGGTGATATTTGGGTTGTTCTTCACGTTACGCTACTTCAAACAGAAGTATGTTCAATCGAGAAACACTTATGGTGATTCCTTCCAAAATCCAGACACAGAGAGTGACATGATCTTCTTTGGGGTACCCATCTTCTCCTATAAGGAACTTCAAGAAGCAACTAACAATTTTGACTCCACTAGAAAGCTCGGAGATGGAGGCTTTGGCATTGTTTACCACGGGACACTGAGAGATGGAAGGGAAGTTGCAATCAAACATCTATTTGAGCACAATTACAAGAGAGTGGAACAGTTTATGAATGAAATTGAGATCCTTACTCGCTTGCGCCACAGAAATCTTGTGTCCCTCTATGGCTGCACTTCACGTCACGGCCAGGAGCTGTTGCTTGTGTATGAATACATTCCAAATGGCACAGTTGCTAGCCATCTCCACGGTGAATTAGCAAGAGTTGGTTTGCTGACATGGCCTATTCGAATGCAAATTGCCATAGACACTGCTACTGCACTCTCCTATCTCCATTCTTCTAACATCATTCACCGTGATGTGAAGACCAATAACGTTCTACTTGACATTAATTTTTCCGTTAAGGTAGCAGATTTTGGGCTTTCAAGATTGTTCCCCAGTGATGTAAGTCACGTGTCCACAGCTCCACAGGGATCTCCGGGGTATCTTGATCCTGAATATTTTCAATGTTACAGGCTCACAGATAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTAATGGAACTAATATCATCCATGCCAGCAGTTGATGCAGCCAGGGAAAGGGATGAAGTTAACTTAGCAATTTTTTTCATGAAGAGGATTCAAAAAGGAAAGCTTAGTGATCTTGTAGACCAATCCTTTGGGTTTGAGACAGACCAAGTAGTTAAAAGGATGGTGACTTCAGTGGCAGAATTGGCCTTCCGGTGTGTGCAGGGAGACAATGAATTAAGGCCTTCTATGGACCAAGTTCTGGAAGCCCTCCAGAAAATCCAAAATGGGAATTATGAGTCTGAGAATCCAGAGAAAGGAGATCATGCTGGTAATGTTATCTCGTCTATCTCCAGGGAAGAAGTGCAACCACCACCTTCAGCTTCACGGAGTTCGGGTCAAATTGAAATTTTGATGAGTAATAAGCTTTCTTCGCCAAGGTCCTTCATTGAGAAATGGGAAAGGGAATCTACCACTCCCAATGTCAGTAGTTAA 2025 0.4277 MVVVLPLYHMKMKMYDVYVILLFCHLTVLHLSAGNANEHTSDCPDSFDCGSLGNISFPFTTSEHPNCGALAIQGCNNPNQTALKQVRLSSGGKLLQVTNIVGGWRWKISIIDKDYRNLLENSSCNALSYNITVPPSSPFGCFYLENNITALNCSHHKNLNLSNDFINYTGCSPFDFYFAPSSSDQNYLRSLTSSCSMVQLPVRQDSQFFKDPFGFLNPQITFQFQFSSACRRCREKWGNCRLDSNAKLYCAMRKSGAWNRKLPLMLGIGLGPWVIFGLFFTLRYFKQKYVQSRNTYGDSFQNPDTESDMIFFGVPIFSYKELQEATNNFDSTRKLGDGGFGIVYHGTLRDGREVAIKHLFEHNYKRVEQFMNEIEILTRLRHRNLVSLYGCTSRHGQELLLVYEYIPNGTVASHLHGELARVGLLTWPIRMQIAIDTATALSYLHSSNIIHRDVKTNNVLLDINFSVKVADFGLSRLFPSDVSHVSTAPQGSPGYLDPEYFQCYRLTDKSDVYSFGVVLMELISSMPAVDAARERDEVNLAIFFMKRIQKGKLSDLVDQSFGFETDQVVKRMVTSVAELAFRCVQGDNELRPSMDQVLEALQKIQNGNYESENPEKGDHAGNVISSISREEVQPPPSASRSSGQIEILMSNKLSSPRSFIEKWERESTTPNVSS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03797 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Viun7g03797 674 SMART serkin_6 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03797 674 MobiDBLite consensus disorder prediction 626 647 - -
Viun7g03797 674 SUPERFAMILY Protein kinase-like (PK-like) 313 609 IPR011009 -
Viun7g03797 674 ProSiteProfiles Protein kinase domain profile. 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03797 674 Gene3D Transferase(Phosphotransferase) domain 1 406 627 - -
Viun7g03797 674 Gene3D Phosphorylase Kinase; domain 1 301 405 - -
Viun7g03797 674 FunFam Wall-associated receptor kinase-like 20 406 614 - -
Viun7g03797 674 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 668 IPR044652 GO:0004672
Viun7g03797 674 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Viun7g03797 674 CDD STKc_IRAK 335 604 - -
Viun7g03797 674 Pfam Protein tyrosine and serine/threonine kinase 332 601 IPR001245 GO:0004672|GO:0006468
Viun7g03797 674 FunFam receptor-like protein kinase FERONIA 293 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03797 Viun-Chr7 38252344 38256253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03797 41 674 Receptor kinase-like Gene Family AT1G25390 42.791 2.12e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun7g03797 PK_Tyr_Ser-Thr 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03797 - - gmx:100778085 954.896