Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03796 ATGTTTCCTGTTTACATGTTCATTATGGTTTTCCTTGTGTGGGTTGGGAATGGAAATGGGCACAAGGGTGATTGTCCGATGTGGTTTGATTGTGGAAACCATGGGAAATTCGGTTACCCTTTCACCACGCTACAACGCCAAGATTGTGGCATATGGCCAATCCATGGTTGTGATGATCAGAATCCAAAGTCAGGGCAAGGGGTAACGTTAAAGATCGGATCAAGGTGGATTAGGGTTACAAATTTTGAGATGCAATGGACTGGTACTACTGTCTACTTCATTGATGATCATCTCAATAATCTCTTGCAATCCGATAGTTGTGAGACATTCAACCACAATATTTCACTCCCTGCCACCTCTCCCTTAGGTTACTTCACTATCAACAACAACATAACCCTTTTCAAGTGTAACCGCACCCGCCATGTTAAGACCCCCAGAACATTCCTCAAAAACACAAGCTGTGACTATGACATCTTCATTGGGCCTCCACACCCTGATGATGTGTCTCACAATTCTCTAGCTTCCTCCTGTTCAATGGTTCAGCTTCCCGTCAATGGCTATGCAGTCTCTGCAAATCCCTTTGCATTCTTAACTGCTGACATTCCCCTGCAGTTCCATCCGTCAGATGAGTGCATGCACTGTTTGGGTCGCAGAAGCCATTGTCGCCTCGACAACCAACGAAACCTTCATTGCGCCACAAGGAAGGATAAAAGTCCATCTTGGAAGCTAGGATTAATAATAGGTATAGGTGCTGGACTATGCAATGTAATAACATTGGTGTTGATCCTCACATTACGGCGCTGCGAAGGTAAATATGGTGGTGCACTAGCTCTGTTCCGATCAAGACACGGTGCTGATCCTCACGACAATCCCGACTTAATGGCAGATAGGATCTTCTTTGGAGTACCCGTCTTCTCTTATAAGGAGCTTCAAGAAGCAACAAACAATTTTGACCGCAACAGAAAGCTAGGGGAGGGAGGATTCGGAAGCGTTTACTATGGTAAACTCGAAGATGGACGGGAAGTTGCAGTGAAATTCTTTTTCGAGAACAACTACAGGAGAGTGCAACAATTTATGAACGAAATTGAGATTCTCACTCACCTGCGACACAGGAACCTCGTCTCCCTCTACGGTTGCACTTCGCGTCACAGCCGTGAGTTACTGCTTGTGTACGAATACGTCCCAAACGGCACTCTTGCTTGCCATCTCAAGGGAAGGGACAAGTTGCTGACGTGGCCAATTCGGATGCAAATTGCGGTGGAGACCGCCACTGCCTTGGCTTATCTCCACGCTTCCGACATCATTCACCGCGACGTGAAAAGCAGCAACATTCTACTTGACACAAATTTTATGGTTAAGGTGGCCGATTTTGGGCTTTCGAGGTTGCTTCCGACCGATGCAAGCCACGTGTCAACGGGTCCGCAGGGGACTCCGGGGTACCTTGACCCTGAGTATTTCCAGCACTACAAGCTGACGGACAAGAGTGATGTATTTAGCTTTGGGGTTGTGGTGTCTGAGCTGATATCCTCGTTGCCTGCGGTTGATGCCGGCAGGGAAAGTGATGAGATCAACTTGGTGAGTCTTACCATAAAGAAGATTCAAAATGGGAAACTCAGTGAGTTGGTGTGCCAATCGCTTGGTTTTGAATCAGACGAAGAAGTGAGAAGGACGGTGAGTTCAGTGGCGGAATTGGCCTTCCTGTGTGTACAAGGAGACAGGCAATTAAGACCTTCCATGGATGAAGTTCTGGAAACACTGCAGAAAATTCAAACTGGGATTGGTGAGTGTGAAATGTAG 1797 0.4686 MFPVYMFIMVFLVWVGNGNGHKGDCPMWFDCGNHGKFGYPFTTLQRQDCGIWPIHGCDDQNPKSGQGVTLKIGSRWIRVTNFEMQWTGTTVYFIDDHLNNLLQSDSCETFNHNISLPATSPLGYFTINNNITLFKCNRTRHVKTPRTFLKNTSCDYDIFIGPPHPDDVSHNSLASSCSMVQLPVNGYAVSANPFAFLTADIPLQFHPSDECMHCLGRRSHCRLDNQRNLHCATRKDKSPSWKLGLIIGIGAGLCNVITLVLILTLRRCEGKYGGALALFRSRHGADPHDNPDLMADRIFFGVPVFSYKELQEATNNFDRNRKLGEGGFGSVYYGKLEDGREVAVKFFFENNYRRVQQFMNEIEILTHLRHRNLVSLYGCTSRHSRELLLVYEYVPNGTLACHLKGRDKLLTWPIRMQIAVETATALAYLHASDIIHRDVKSSNILLDTNFMVKVADFGLSRLLPTDASHVSTGPQGTPGYLDPEYFQHYKLTDKSDVFSFGVVVSELISSLPAVDAGRESDEINLVSLTIKKIQNGKLSELVCQSLGFESDEEVRRTVSSVAELAFLCVQGDRQLRPSMDEVLETLQKIQTGIGECEM 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03796 598 SMART serkin_6 317 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03796 598 Gene3D Phosphorylase Kinase; domain 1 295 393 - -
Viun7g03796 598 SUPERFAMILY Protein kinase-like (PK-like) 298 590 IPR011009 -
Viun7g03796 598 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 4 592 IPR044652 GO:0004672
Viun7g03796 598 Pfam Protein tyrosine and serine/threonine kinase 320 586 IPR001245 GO:0004672|GO:0006468
Viun7g03796 598 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Viun7g03796 598 ProSiteProfiles Protein kinase domain profile. 317 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03796 598 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 298 393 - -
Viun7g03796 598 Gene3D Transferase(Phosphotransferase) domain 1 394 595 - -
Viun7g03796 598 FunFam Wall-associated receptor kinase-like 20 394 597 - -
Viun7g03796 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03796 Viun-Chr7 38246663 38249163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03796 29 596 Receptor kinase-like Gene Family AT1G25390 44.965 1.19e-147 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun7g03796 PK_Tyr_Ser-Thr 3.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03796 - - gmx:100789695 879.011