Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03795 ATGGTCTGGGTTATTGTTTTGAAGTTGCTCATAGTCTATTTGTCACAGCTTGTGCTTATTGTTTCAGCTCAGAAAGAAAAGTGTCCACCATCTTTTGATTGTGGAATTCTTGGCCACATTCAGTTTCCTTTCACAACCACTGAGCAACAACACTGCGGCGTATTGGCTATACATGGCTGTCAACAACTTTCTCCTTCCGCTCCCAGAACTATCCAACTAGGCACCTCCCCATCAACCTCGTACTCTGTTCTAAGTGTAGAACCTCGTACCATATTTATCTCAGATGATAAGCAGCAACGTTATTTGAAAAACAAAAGTTGCAAAGCGTTCAGCAAGAATGTTACTCTTCCTCACACCTCTCCTTTAGCTTCTTTCAGCATCAAATATAATATCACCATCTTCAGATGCAATCACTCCATCAAACCCTCCCTTTCCAACGATTTTCATACATATTCGAACTGTTCTGAGTACGACATCTTCTATGGCCCTCCAAATACACTAACTCCTCCGCGTTTCCAGTGGCCCAGCTCTTTAGCACCATGCTCAACCATTCAGCTTGCTGTAGAAGCAAATTCTACCGACGACCCCTTTCAATTTCTAACAGATAGTATCGCTGTTGAAGTTCAGTTATCTGATCAATGTGAAAGGTGTCTTCGTCGTAGTAAAGGACGATGTTTACTTGACACCAAAAGAGAATTCTACTGCTCCGCAGAGGGTAGGAATTTGGCATTGAAGTTGGGACTAGGTATTGGAATGTCGTGTACTGTTATCATTGGGCTACTAATACTATGGTACAGCAAACCCAGATGTGTCTTTAATTTCTTTTCAAATCGAAACCCAGAAAGTACGTGTATCTATTTTGGGGTCCCTGTCTTCACTTATAAGGATCTTGTAATAGCAACAAAAAGTTTTGATTGTTCGAGAGAACTAGGAGAAGGAGGCTTTGGGATTGTTTACTATGGAAAACTCCAGGATGGACGTGAAGTTGCTGTGAAGCGGCTATATGAGCACAACTATAGGAGAGTAGAACAGTTCATGAATGAAATCAAGATCCTCACACGCTTGCGCAACAAAAACTTAGTGTCTCTCTATGGCTGCACTTCACATGATAGCCGTGAACTACTGCTTGTGTATGAATACATTTCAAATGGAACTGTGGCCAGTCACCTCCATCGTCATGAATCAACGAGTCGTAGCTCTTTGCCGTGGCTTATCCGAATGAAAGTGGCCATTGAGACTGCTACTGCATTGGCCTATCTCCATGCCTCCGACATCATTCACCGTGATGTCAAAACCAGCAACATTCTGCTCGACAACACTTTTTGCGTTAAAGTTGCAGATTTTGGATTGTCGAGACTGTTCCCGGTTGATGTCACCCATGTTTCCACTGCTCCACAAGGCACCCCTGGCTATGTTGATCCGGAATATCACCGCTGCTACCAACTTACCAACAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTAATATCATCTATGCCGGCAATTGATCTGAACCGCCATAAGGATGAAATAAACTTAGCAGATCTAGCCGTTAGGAAGATTCATAAAAATGCAATTGCTGATCTGGTGGATCCTTCCCTTGGTTTTGAGTCGAATGATGATGTTAAAAGACAAATCATTGCAGTAGCAGAATTGGCTTTTCAATGCTTGCAACAGGACAAAGACTTGAGACCCTCCATGGATGAGGTGTTGGAGGTTCTGAAAAGAATAGAAAGTGGGAAGGATGAAGAGCCATCATCACCATCTTCAGTAGATCACGATGACGTGAAATTGTTGATGAATATGAAGTTGCCACCTTCGCCAAGGGCTGTTACGGATAAATGGAACAGTCGCTCTACCAGTCCTAATGTCAGTGGTCAATAA 1893 0.4284 MVWVIVLKLLIVYLSQLVLIVSAQKEKCPPSFDCGILGHIQFPFTTTEQQHCGVLAIHGCQQLSPSAPRTIQLGTSPSTSYSVLSVEPRTIFISDDKQQRYLKNKSCKAFSKNVTLPHTSPLASFSIKYNITIFRCNHSIKPSLSNDFHTYSNCSEYDIFYGPPNTLTPPRFQWPSSLAPCSTIQLAVEANSTDDPFQFLTDSIAVEVQLSDQCERCLRRSKGRCLLDTKREFYCSAEGRNLALKLGLGIGMSCTVIIGLLILWYSKPRCVFNFFSNRNPESTCIYFGVPVFTYKDLVIATKSFDCSRELGEGGFGIVYYGKLQDGREVAVKRLYEHNYRRVEQFMNEIKILTRLRNKNLVSLYGCTSHDSRELLLVYEYISNGTVASHLHRHESTSRSSLPWLIRMKVAIETATALAYLHASDIIHRDVKTSNILLDNTFCVKVADFGLSRLFPVDVTHVSTAPQGTPGYVDPEYHRCYQLTNKSDVYSFGVVLMELISSMPAIDLNRHKDEINLADLAVRKIHKNAIADLVDPSLGFESNDDVKRQIIAVAELAFQCLQQDKDLRPSMDEVLEVLKRIESGKDEEPSSPSSVDHDDVKLLMNMKLPPSPRAVTDKWNSRSTSPNVSGQ 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03795 630 MobiDBLite consensus disorder prediction 581 630 - -
Viun7g03795 630 ProSiteProfiles Protein kinase domain profile. 304 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03795 630 MobiDBLite consensus disorder prediction 581 602 - -
Viun7g03795 630 SMART serkin_6 304 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03795 630 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Viun7g03795 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Viun7g03795 630 MobiDBLite consensus disorder prediction 615 630 - -
Viun7g03795 630 SUPERFAMILY Protein kinase-like (PK-like) 278 581 IPR011009 -
Viun7g03795 630 Pfam Protein tyrosine and serine/threonine kinase 306 576 IPR001245 GO:0004672|GO:0006468
Viun7g03795 630 Gene3D Transferase(Phosphotransferase) domain 1 381 589 - -
Viun7g03795 630 FunFam Wall-associated receptor kinase-like 20 381 590 - -
Viun7g03795 630 Gene3D Phosphorylase Kinase; domain 1 276 380 - -
Viun7g03795 630 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 623 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03795 Viun-Chr7 38241637 38245594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03795 22 629 Receptor kinase-like Gene Family AT1G25390 46.562 1.92e-165 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun7g03795 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03795 - - gmx:100790240 864.759