Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03794 ATGGTCTGGGTTATTGTTTTGAAGTTGCTCATAGTCTATTTGTCACAGCTTGTGCTTATTGTTTCAGCTCAGAAAGAAAAGTGTCCACCATCTTTTGATTGTGGAATTCTTGGCCACATTCAGTTTCCTTTCACAACCACTGAGCAACAACACTGCGGCGTATTGGCTATACATGGCTGTCAACAACTTTCTCCTTCCGCTCCCAGAACTATCCAACTAGGCACCTCCCCATCAACCTCGTACTCTGTTCTAAGTGTAGAACCTCGTACCATATTTATCTCAGATGATAAGCAGCAACGTTATTTGAAAAACAAAAGTTGCAAAGCGTTCAGCAAGAATGTTACTCTTCCTCACACCTCTCCTTTAGCTTCTTTCAGCATCAAATATAATATCACCATCTTCAGATGCAATCACTCCATCAAACCCTCCCTTTCCAACGATTTTCATACATATTCGAACTGTTCTGAGTACGACATCTTCTATGGCCCTCCAAATACACTAACTCCTCCGCGTTTCCAGTGGCCCAGCTCTTTAGCACCATGCTCAACCATTCAGCTTGCTGTAGAAGCAAATTCTACCGACGACCCCTTTCAATTTCTAACAGATAGTATCGCTGTTGAAGTTCAGTTATCTGATCAATGTGAAAGGTGTCTTCGTCGTAGTAAAGGACGATGTTTACTTGACACCAAAAGAGAATTCTACTGCTCCGCAGAGGGTAGGAATTTGGCATTGAAGTTGGGACTAGGAAAACTCCAGGATGGACGTGAAGTTGCTGTGAAGCGGCTATATGAGCACAACTATAGGAGAGTAGAACAGTTCATGAATGAAATCAAGATCCTCACACGCTTGCGCAACAAAAACTTAGTGTCTCTCTATGGCTGCACTTCACATGATAGCCGTGAACTACTGCTTGTGTATGAATACATTTCAAATGGAACTGTGGCCAGTCACCTCCATCGTCATGAATCAACGAGTCGTAGCTCTTTGCCGTGGCTTATCCGAATGAAAGTGGCCATTGAGACTGCTACTGCATTGGCCTATCTCCATGCCTCCGACATCATTCACCGTGATGTCAAAACCAGCAACATTCTGCTCGACAACACTTTTTGCGTTAAAGTTGCAGATTTTGGATTGTCGAGACTGTTCCCGGTTGATGTCACCCATGTTTCCACTGCTCCACAAGGCACCCCTGGCTATGTTGATCCGGAATATCACCGCTGCTACCAACTTACCAACAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTAATATCATCTATGCCGGCAATTGATCTGAACCGCCATAAGGATGAAATAAACTTAGCAGATCTAGCCGTTAGGAAGATTCATAAAAATGCAATTGCTGATCTGGTGGATCCTTCCCTTGGTTTTGAGTCGAATGATGATGTTAAAAGACAAATCATTGCAGTAGCAGAATTGGCTTTTCAATGCTTGCAACAGGACAAAGACTTGAGACCCTCCATGGATGAGGTGTTGGAGGTTCTGAAAAGAATAGAAAGTGGGAAGGATGAAGAGCCATCATCACCATCTTCAGTAGATCACGATGACGTGAAATTGTTGATGAATATGAAGTTGCCACCTTCGCCAAGGGCTGTTACGGATAAATGGAACAGTCGCTCTACCAGTCCTAATGTCAGTGGTCAATAA 1677 0.4353 MVWVIVLKLLIVYLSQLVLIVSAQKEKCPPSFDCGILGHIQFPFTTTEQQHCGVLAIHGCQQLSPSAPRTIQLGTSPSTSYSVLSVEPRTIFISDDKQQRYLKNKSCKAFSKNVTLPHTSPLASFSIKYNITIFRCNHSIKPSLSNDFHTYSNCSEYDIFYGPPNTLTPPRFQWPSSLAPCSTIQLAVEANSTDDPFQFLTDSIAVEVQLSDQCERCLRRSKGRCLLDTKREFYCSAEGRNLALKLGLGKLQDGREVAVKRLYEHNYRRVEQFMNEIKILTRLRNKNLVSLYGCTSHDSRELLLVYEYISNGTVASHLHRHESTSRSSLPWLIRMKVAIETATALAYLHASDIIHRDVKTSNILLDNTFCVKVADFGLSRLFPVDVTHVSTAPQGTPGYVDPEYHRCYQLTNKSDVYSFGVVLMELISSMPAIDLNRHKDEINLADLAVRKIHKNAIADLVDPSLGFESNDDVKRQIIAVAELAFQCLQQDKDLRPSMDEVLEVLKRIESGKDEEPSSPSSVDHDDVKLLMNMKLPPSPRAVTDKWNSRSTSPNVSGQ 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03794 558 SUPERFAMILY Protein kinase-like (PK-like) 251 528 IPR011009 -
Viun7g03794 558 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 249 551 IPR044652 GO:0004672
Viun7g03794 558 FunFam Wall-associated receptor kinase-like 20 309 518 - -
Viun7g03794 558 Pfam Protein tyrosine and serine/threonine kinase 252 504 IPR001245 GO:0004672|GO:0006468
Viun7g03794 558 Gene3D Transferase(Phosphotransferase) domain 1 310 528 - -
Viun7g03794 558 Gene3D Phosphorylase Kinase; domain 1 246 309 - -
Viun7g03794 558 SMART serkin_6 240 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03794 558 MobiDBLite consensus disorder prediction 509 558 - -
Viun7g03794 558 MobiDBLite consensus disorder prediction 509 530 - -
Viun7g03794 558 ProSiteProfiles Protein kinase domain profile. 230 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03794 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Viun7g03794 558 MobiDBLite consensus disorder prediction 543 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03794 Viun-Chr7 38241637 38245597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03794 249 557 Receptor kinase-like Gene Family AT1G25390 64.263 6.32e-141 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun7g03794 PK_Tyr_Ser-Thr 6.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03794 - - aprc:113871893 514.612