Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03793 ATGGCTATCGTAGATTTGTTCTGCTTCCTCTTGTTTTATCACCTTGTACTCATCCTCTGTGCTGGTTATGGATATGGACACCAAGGTTGTCCACATTCCTTTACCTGTGGCCATCTTGGGTCTTTTCATTACCCTTTTACCAAGGCAGAACAACCAGACTGTGGCTTGATACCTATACATGATTGTGATAATTCTCAGTCAATCCAAAAAAAGATCCAGCTGGAGAAAAATGGAAAACACTTTGTGCTTACAGGCATCACTCAGCAGGATGGGATTTCAATTTCAGATGAAGATTTGCACAAGCGTTTACAAAACAACATCTGTGACACTTTGAATAATAGCTATAGTCTTTCATCCCATTCTTCTTTATACTCTTGTTATATAAAATATAATGTAACACTGTTCCGATGCAAACATGGCCTCAGTATGAAACCCCCGGCACATTATTTCAATCACTCCTGCCCTGAGTATGATTATGATATCTATTATGACAGCCTTTCCTTCCTTAATAATGATGAGGCTCATAAACTTTTCTCATCATGCTCGGTTCTTACGTTAGCAAAAAAGGACAAGCCTGATACCACAGACATTCTATCGTTTGTATCTGCTCAGATGGTTGTTCAAGTACTATTATCTAAGGATTGTGATGACTGCTATAATCACAGAGGAGGTCAATGTCGTCTTGACCGCGATCAACAGTTCTACTGTCACGAAGAGCCAAAGAATAAGAGTAAAACTTTGAAGCTGGTACTTGGACTCGTAACAGGTTTATGCGTGATATTATTAGCCATGGTGCTAATTGGATGCCTTATATTTAGACGAAAATGCACTCCTTCAGACCCCCAACACCAATCGAGAAACGCGGACACCGATTCAATTGGTCCCAGCTCAAATTCAGACCCCGAAAATTGCAGGTTCTACTACGGAGTCCCTCTCTTCTCTTACAAGGAGCTTAAAGAAGCCACATACAATTTCCACCACGCCAGACAACTTGGAAGTGGAGGCTTTGGAACCGTTTACTATGGAAAACTGCGAGATGGACGAGAAGTTGCCATCAAGCGTCTCTATGAGCACAACTACAGGCGCGTTGAACAGTTCATGAACGAAGTTCACATCCTCACTCGCTTGCGCCACACAAATCTGGTGTCCCTCTATGGCTGCACTTCACATCGCAGTCGTGAACTACTGCTCGTGTACGAACACGTCCCGAATGGCACTGTTGCTTGCCATCTCCACGGTGATTTTGCAAGGCCACGCACTCTTCCATGGCACATAAGAATGAAAATTGCCATAGAGACCGCAAGTGCATTGTGTTATCTCCATGCTTCTGACATCGTCCACCGTGATGTCAAAACCAAAAACATTCTCCTTACCCAAAGCTTCAGTGTTAAGGTTGCTGACTTTGGTCTTTCAAGGCTGTTCCCGAACGATGTCACGCATGTCTCCACTGCTCCACTAGGGACCCCAGGTTACCTTGACCCGGAATATCACCAATGCTACCAGCTTACAAACAAGAGTGATGTGTTTAGTTTTGGGGTTGTGCTTATTGAACTGATATCTTCTATGGCAGCTGTTGATATGAGCAGGCATAGGGATGAGATAAACTTGTCTAACTTGGCAATAAAGAAGATTCAGCAAAGTGCATTCAGTGAGCTGGTTGATCCTTCTCTTGGTTTTGATTCGGACAGTGAGGTAAAGAGGATGATGATTTCAGTGGCAGAATTGGCCTTTCAGTGTTTGCAACGAGACAAAGATTTGAGACCCTCAATGGATGAGGTTTTGAAGGTGCTGATGAGAATTGAAAGTGGGAGGGATGAAGAACATTTACTTCCACCCTCTCTACCTTCACCAGATTGGGAAGATAATGGATTATTGAAAAAGATGATTGTTCAACCTTCACCTAAAGCCGTCACTGATACATGGCACAGTGAATCTACTGCTTCTAATGCCAGTGCTTAA 1959 0.4308 MAIVDLFCFLLFYHLVLILCAGYGYGHQGCPHSFTCGHLGSFHYPFTKAEQPDCGLIPIHDCDNSQSIQKKIQLEKNGKHFVLTGITQQDGISISDEDLHKRLQNNICDTLNNSYSLSSHSSLYSCYIKYNVTLFRCKHGLSMKPPAHYFNHSCPEYDYDIYYDSLSFLNNDEAHKLFSSCSVLTLAKKDKPDTTDILSFVSAQMVVQVLLSKDCDDCYNHRGGQCRLDRDQQFYCHEEPKNKSKTLKLVLGLVTGLCVILLAMVLIGCLIFRRKCTPSDPQHQSRNADTDSIGPSSNSDPENCRFYYGVPLFSYKELKEATYNFHHARQLGSGGFGTVYYGKLRDGREVAIKRLYEHNYRRVEQFMNEVHILTRLRHTNLVSLYGCTSHRSRELLLVYEHVPNGTVACHLHGDFARPRTLPWHIRMKIAIETASALCYLHASDIVHRDVKTKNILLTQSFSVKVADFGLSRLFPNDVTHVSTAPLGTPGYLDPEYHQCYQLTNKSDVFSFGVVLIELISSMAAVDMSRHRDEINLSNLAIKKIQQSAFSELVDPSLGFDSDSEVKRMMISVAELAFQCLQRDKDLRPSMDEVLKVLMRIESGRDEEHLLPPSLPSPDWEDNGLLKKMIVQPSPKAVTDTWHSESTASNASA 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03793 652 MobiDBLite consensus disorder prediction 281 299 - -
Viun7g03793 652 FunFam Wall-associated receptor kinase-like 20 402 609 - -
Viun7g03793 652 SUPERFAMILY Protein kinase-like (PK-like) 307 616 IPR011009 -
Viun7g03793 652 Gene3D Phosphorylase Kinase; domain 1 298 401 - -
Viun7g03793 652 SMART serkin_6 325 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03793 652 MobiDBLite consensus disorder prediction 277 299 - -
Viun7g03793 652 Pfam Protein kinase domain 325 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03793 652 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 646 IPR044652 GO:0004672
Viun7g03793 652 Gene3D Transferase(Phosphotransferase) domain 1 402 608 - -
Viun7g03793 652 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Viun7g03793 652 ProSiteProfiles Protein kinase domain profile. 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03793 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03793 Viun-Chr7 38232013 38234503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03793 29 652 Receptor kinase-like Gene Family AT1G25390 48.038 1.20e-176 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun7g03793 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03793 - - gmx:100791822 1041.18