Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03792 ATGAGTCTGGTTCATGAATTCGTATTGCTGCTTTTGTTTTCTAACTTTATGCCACTTCTCTTGGCGGCTGGGGACCAAGGAAGGTGTCCACCTTCATTTCATTGTGGATATCTTGGCAATATCACTTTCCCTTTTACTGTAATTGGACGCCAGGACTGTGGCTTCTTGTCCATACGAAATTGTAATGATCATGATCCACATACGCCGAAATTTATCCAAGTACAAGCAAATGGAAATTGGGATCAGGTTGTAGCCATATATCCGCTTTTTAGCATCCCTACAACCCATTTCGCAACTTTTCAATTCAGAGACAAACATTTCTATGACCTTCTGCAGAACCGGAATTGTGAAGCTTTCACAAACAGTTATACTCTTCCGCTTATTTCTCACTTTGCTACTTTTAGACTGGCACACAACGCAACTCTGTTCTTGTGCAACAAGACCCTCAATGTCACAAATATAAATACGAGCAAGTATAATGGGTGCCTTGGCTACGATCTCTACTACAACCACTTCACTACAGATGATGATGCGTCTCGGAGTTCTTTTACAGCGTGTAAAAAGGTCGTGCTTCCAATTAAAGACGTGCCTGACGCCAATGACCCTTTTACTTTCGTAACCGGCGATGTTAACGTTATAGTAGCATTAACAGATCAATGTTCAGATTGCCACTATCGCAAAGGGCAGTGTCAACTTGACAGCAGAGAGCAATTTTGTTGTGCCAATGTTCCGGAAAAAAGGTCTCGTTGGAAGGTCAAACTGGGTTTAGGTTTAGGCATTGGAGTCCCATGCATGATTTTAATTGGGTTGTTGTTTTTCCTTCTCCTCCGCAAACGAAAACATGCTACCTCAGGTGGACAACTAAAGTCAAGAGATTCTTATTCTGATTCCTCCTCGATTTCTCATCGAGCAAGTAGTGCCGAATACTTTGGAGTTCCACTCTTCTCTTACGCGCAGCTTAAAGAAGTGACAAACAATTTCGACCATGCTCAGGAACTTGGAGATGGAGGCTTCGGTACTGTCTACTATGGGAAACTCCCAGATGGAAGGGAAGTTGCGGTGAAGCGGTTATACGAGCACAATTGGAGGCGAGTAGAACAGTTCATGAACGAAGTTAAAATCCTCACACGGTTGCGTCACAAAAATCTAGTGTCACTCTACGGCTGCACTTCACGGCACAGTCGTGAACTCCTACTTGTGTACGAATACATTTCAAACGGCACCGTAGCATGTCATCTGCACGGTGGATTAGCGAAGCCTGGGTTACTACCATGGCCTACACGTATGAAAATTGCCATAGAAACTGCCAGTGCATTGGCTTATCTCCACGCCTCAGACATCATCCACCGTGACGTGAAAACAAACAACATTCTCCTGGACAACAACTTCTGTGTTAAGGTAGCAGATTTTGGTCTTTCAAGAGACTTCCCAAACGACGTAACACATGTCTCCACAGCTCCACAAGGGTCCCCGGGTTACCTTGACCCTGAATATTACAGCTGCTACCAGCTGACTGGTAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTGATATCATCCAAGCCTGCGGTTGATATGAACAGGAGTAGGGATGAGATTAACTTGTCAAATCTAGCAGTTAGGAAGATTCAAGAAAGTGCAATTGGTGAACTTGTAGATCCTTGCCTTGGTTTTGATTCGGACAGTAGGGTTAAGGGGATGATAGTTTCAGTGGCAGGGTTGGCTTTACAGTGTTTGCAGAGGGAGAAGGAGTTGAGACCTTCGATGGATGAGGTGTTGCATGAACTGCAGAGAATTGAGGGTGGGAAGGATGAGATAGATGTTGATAATGGAGGAATTGCAGAAAGTCGTGCACATTCACCACCACCGGCTTCACCGGAGTGGGATGAAGTTGTACTGTTGAAGAATACGAAGCCTACTTCCCCTGACACTGTCACTGATAAATGGGAAAGTAAATGTACTACACCTAATATAAGTGGCTAA 1992 0.4423 MSLVHEFVLLLLFSNFMPLLLAAGDQGRCPPSFHCGYLGNITFPFTVIGRQDCGFLSIRNCNDHDPHTPKFIQVQANGNWDQVVAIYPLFSIPTTHFATFQFRDKHFYDLLQNRNCEAFTNSYTLPLISHFATFRLAHNATLFLCNKTLNVTNINTSKYNGCLGYDLYYNHFTTDDDASRSSFTACKKVVLPIKDVPDANDPFTFVTGDVNVIVALTDQCSDCHYRKGQCQLDSREQFCCANVPEKRSRWKVKLGLGLGIGVPCMILIGLLFFLLLRKRKHATSGGQLKSRDSYSDSSSISHRASSAEYFGVPLFSYAQLKEVTNNFDHAQELGDGGFGTVYYGKLPDGREVAVKRLYEHNWRRVEQFMNEVKILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGGLAKPGLLPWPTRMKIAIETASALAYLHASDIIHRDVKTNNILLDNNFCVKVADFGLSRDFPNDVTHVSTAPQGSPGYLDPEYYSCYQLTGKSDVYSFGVVLIELISSKPAVDMNRSRDEINLSNLAVRKIQESAIGELVDPCLGFDSDSRVKGMIVSVAGLALQCLQREKELRPSMDEVLHELQRIEGGKDEIDVDNGGIAESRAHSPPPASPEWDEVVLLKNTKPTSPDTVTDKWESKCTTPNISG 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03792 663 Gene3D Transferase(Phosphotransferase) domain 1 404 610 - -
Viun7g03792 663 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Viun7g03792 663 MobiDBLite consensus disorder prediction 607 663 - -
Viun7g03792 663 Gene3D Phosphorylase Kinase; domain 1 299 403 - -
Viun7g03792 663 SUPERFAMILY Protein kinase-like (PK-like) 301 599 IPR011009 -
Viun7g03792 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Viun7g03792 663 MobiDBLite consensus disorder prediction 640 663 - -
Viun7g03792 663 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 657 IPR044652 GO:0004672
Viun7g03792 663 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 299 403 - -
Viun7g03792 663 ProSiteProfiles Protein kinase domain profile. 327 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03792 663 CDD STKc_IRAK 333 602 - -
Viun7g03792 663 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03792 663 Pfam Protein tyrosine and serine/threonine kinase 330 597 IPR001245 GO:0004672|GO:0006468
Viun7g03792 663 FunFam Wall-associated receptor kinase-like 20 404 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03792 Viun-Chr7 38225776 38230346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03792 33 663 Receptor kinase-like Gene Family AT1G25390 46.792 8.63e-171 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun7g03792 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03792 - - vra:106771857 1103.97