Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03791 ATGATGAACCCAAACACCCAATTTTTTATCCTCAAACCCCTCTATTTTCGCATCACCAATTCCTACATCATCATCTTCTACCTCCTCGCCCAAATCACTTCTTCTCAGGTCGACCCTAAATTCACAGCATGTGCACCCAAAACCTGCCCCAACAACAACCAATCTATTAGTTTTCCCTTTTACATCCAAGGAACGCAACTACCTTACTGTGGGAGCCCTGGTTTTGAAATCTCGTGTGCTCCAGATGGTTCCCCTACCCTCAATCTCTCTCACACACAATACCTCATTCATCAAATCTTCTACCAAAACCAATCCCTGCGAGTGTCCAATGCTGCGTTCTCAACTTTGCAATCAAACGCCACCGGAGGTTGTCTTGTTCCAACTCAGAATCTCACTCTTCCTCCCAGTAACGAGTTCCGTGTTGCTCCCAATCAAACGGGCATGGTGTTGTTCTACGGCTGTGACGCACCTTCGCTTCACGAACACAGGGTTGGGTGTTCTGCAGGAAACCGGACGAGTTCCGTTTTGGCATTGGATAAAAGAGATGAGAATATAAGCTTTGTGGCAGAGAATTGCAAGGGCGCGGTGGTGGATACGGTGGTGGAAGATGGAATAGGAAGGGTTGCTGAAGCGTTGAGAAAAGGGTTTTTGTTGTCGTGGACTGCGAGTAACTGCAGCGTCTGCAACAGCACCGGAGGGAGGTGCGGTTTCGATTCAGATATGTACACCTTTAGATGTTATTGCACTGACAGAGTTCATTCTGCAAAATGTGGTCCGGATGATCCAGTTCCGGAAAAAAGGTCTCGTTGGAAGGTCAAACTGGGTTTAGGTTTAGGCATTGGAGTCCCATGCATGATTTTAATTGGGTTGTTGTTTTTCCTTCTCCTCCGCAAACGAAAACATGCTACCTCAGGTGGACAACTAAAGTCAAGAGATTCTTATTCTGATTCCTCCTCGATTTCTCATCGAGCAAGTAGTGCCGAATACTTTGGAGTTCCACTCTTCTCTTACGCGCAGCTTAAAGAAGTGACAAACAATTTCGACCATGCTCAGGAACTTGGAGATGGAGGCTTCGGTACTGTCTACTATGGGAAACTCCCAGATGGAAGGGAAGTTGCGGTGAAGCGGTTATACGAGCACAATTGGAGGCGAGTAGAACAGTTCATGAACGAAGTTAAAATCCTCACACGGTTGCGTCACAAAAATCTAGTGTCACTCTACGGCTGCACTTCACGGCACAGTCGTGAACTCCTACTTGTGTACGAATACATTTCAAACGGCACCGTAGCATGTCATCTGCACGGTGGATTAGCGAAGCCTGGGTTACTACCATGGCCTACACGTATGAAAATTGCCATAGAAACTGCCAGTGCATTGGCTTATCTCCACGCCTCAGACATCATCCACCGTGACGTGAAAACAAACAACATTCTCCTGGACAACAACTTCTGTGTTAAGGTAGCAGATTTTGGTCTTTCAAGAGACTTCCCAAACGACGTAACACATGTCTCCACAGCTCCACAAGGGTCCCCGGGTTACCTTGACCCTGAATATTACAGCTGCTACCAGCTGACTGGTAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTGATATCATCCAAGCCTGCGGTTGATATGAACAGGAGTAGGGATGAGATTAACTTGTCAAATCTAGCAGTTAGGAAGATTCAAGAAAGTGCAATTGGTGAACTTGTAGATCCTTGCCTTGGTTTTGATTCGGACAGTAGGGTTAAGGGGATGATAGTTTCAGTGGCAGGGTTGGCTTTACAGTGTTTGCAGAGGGAGAAGGAGTTGAGACCTTCGATGGATGAGGTGTTGCATGAACTGCAGAGAATTGAGGGTGGGAAGGATGAGATAGATGTTGATAATGGAGGAATTGCAGAAAGTCGTGCACATTCACCACCACCGGCTTCACCGGAGTGGGATGAAGTTGTACTGTTGAAGAATACGAAGCCTACTTCCCCTGACACTGTCACTGATAAATGGGAAAGTAAATGTACTACACCTAATATAAGTGGCTAA 2052 0.4635 MMNPNTQFFILKPLYFRITNSYIIIFYLLAQITSSQVDPKFTACAPKTCPNNNQSISFPFYIQGTQLPYCGSPGFEISCAPDGSPTLNLSHTQYLIHQIFYQNQSLRVSNAAFSTLQSNATGGCLVPTQNLTLPPSNEFRVAPNQTGMVLFYGCDAPSLHEHRVGCSAGNRTSSVLALDKRDENISFVAENCKGAVVDTVVEDGIGRVAEALRKGFLLSWTASNCSVCNSTGGRCGFDSDMYTFRCYCTDRVHSAKCGPDDPVPEKRSRWKVKLGLGLGIGVPCMILIGLLFFLLLRKRKHATSGGQLKSRDSYSDSSSISHRASSAEYFGVPLFSYAQLKEVTNNFDHAQELGDGGFGTVYYGKLPDGREVAVKRLYEHNWRRVEQFMNEVKILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGGLAKPGLLPWPTRMKIAIETASALAYLHASDIIHRDVKTNNILLDNNFCVKVADFGLSRDFPNDVTHVSTAPQGSPGYLDPEYYSCYQLTGKSDVYSFGVVLIELISSKPAVDMNRSRDEINLSNLAVRKIQESAIGELVDPCLGFDSDSRVKGMIVSVAGLALQCLQREKELRPSMDEVLHELQRIEGGKDEIDVDNGGIAESRAHSPPPASPEWDEVVLLKNTKPTSPDTVTDKWESKCTTPNISG 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03791 683 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Viun7g03791 683 Gene3D Phosphorylase Kinase; domain 1 319 423 - -
Viun7g03791 683 SUPERFAMILY Protein kinase-like (PK-like) 321 619 IPR011009 -
Viun7g03791 683 Pfam Wall-associated receptor kinase galacturonan-binding 44 109 IPR025287 GO:0030247
Viun7g03791 683 Gene3D Transferase(Phosphotransferase) domain 1 424 630 - -
Viun7g03791 683 SMART serkin_6 347 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03791 683 Pfam Wall-associated receptor kinase C-terminal 178 250 IPR032872 -
Viun7g03791 683 ProSiteProfiles Protein kinase domain profile. 347 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03791 683 MobiDBLite consensus disorder prediction 627 683 - -
Viun7g03791 683 CDD STKc_IRAK 353 622 - -
Viun7g03791 683 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 319 423 - -
Viun7g03791 683 MobiDBLite consensus disorder prediction 660 683 - -
Viun7g03791 683 Pfam Protein tyrosine and serine/threonine kinase 350 617 IPR001245 GO:0004672|GO:0006468
Viun7g03791 683 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 25 677 IPR044652 GO:0004672
Viun7g03791 683 FunFam Wall-associated receptor kinase-like 20 424 631 - -
Viun7g03791 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03791 Viun-Chr7 38220129 38230346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03791 224 683 Receptor kinase-like Gene Family AT1G25390 55.195 1.55e-162 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun7g03791 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03791 - - gmx:100792345 885.174