Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03780 ATGTTCCCTTTTGTTTTGCTCTTTTACTTTTTCCTTCTCTGCTTCAACTCTATTGCACCTTTGGTGCATTCTCTCAATGCCGAAGGCTCTGTGCTTTTGACACTAAAGCAGTCGCTCACAGACCCGCAAGGCTCCATGAGTAACTGGAATTCCTCTGATGAAAACCCTTGTTCATGGAATGGTATCACTTGCAAGGACCAAAATGTTGTGTCCATCAGCATCCCCAAGAGGAAACTCAACGGCTCTCTCCCTTCTTCTCTGGGATCTCTCTCCCAGCTCCGCCATGTCAACTTCAGGAACAACAAGCTTTTCGGAGACTTGCCTGCACAGCTCTTTCAAGCTCAGGGACTGCAAAGCTTGGTGCTTTATGGCAATTCATTTTCCGGGCCTGTTTCTAGTGAGATTCAGAATCTCAGGTACCTTCAAACTCTAGATTTATCACAAAATTTCTTTAACGGGTCATTGCCTGCTTCAATTGTCCAATGCAAGAGACTCAAGCTCCTTGTTCTCAGTCAGAACAATTTCTCTGGCCCCTTGCCAGATGGGTTTGGCACTGGTTTGTCTTCTCTGGAAAGACTGGACCTTTCTTTCAATCACTTCAATGGGTCAATTCCCAGTGATTTGGGAAATTTGTCAAGCCTGCAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTCAATTCCAGCCAGCCTCGGTAATCTGCCTGAGAAGGTTTACATTGATCTTACTTTCAACAATTTAAACGGTCCAATTCCTCAGAATGGTGCTTTGATGAACAGAGGACCAACTGCCTTTATTGGCAATCCTGGCCTGTGTGGTCCTCCTTTGAAGAATTCATGCGGTCCTGATACCCCATCTGCTAGTTCACCTCCCTCGTTTCCATTTATTCCAAATAACTACTCAGCTGACGGTAATGGTTCCATGGGAAGTGAGAAAAATAAAGGGCTAAGTAAGGGAGCTGTGGTTAGCATTGTTGTGGGTGATATAATTGGAATTTGCCTCTTAGGTTTGCTGTTCTCTTTTTGCTACTCAAGGGTTTGTGGTTTTAACCAGGATCTTGATGAAGATGGAGTTAACAAGGGAAGCAAAGGGAGGAAAGAGTGTTTCTGCTTCAGAAAGGATGAATCCGAGGTCCTGTCTGATAATAACGTTGAGCAATATGATCTTGTCCCATTAGATTCTCATGTGACTTTTGATTTGGATGAGCTTCTCAAGGCTTCAGCTTTTGTTCTGGGTAAGAGTGGAATAGGGATTATGTACAAAGTGGTGCTTGAAGATGGGCTTGCTTTGGCTGTGAGGAGATTGGGGGAGGGAGGTTCTCAAAGGTTTAAAGAGTTCCAAACCGAGGTAGAAGCAATAGGGAAGTTAAGACATCCAAATATTGCAACCCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATATATCCAACGGAAGCCTTGATACAGCAATTCATGGGAAGGCTGGACTTCTCACATTTGCACCACTTTCTTGGTCCTATCGATTGAAGATCATGAAAGGAACTGCAAGAGGACTGGTCTATCTGCATGAATTTAGCCCCAAAAAATATGTCCATGGAGACCTGAAGCCAAGTAACATACTTCTTGGACAGGACATGGAACCCCACATTTCTGACTTTGGAGTTGGGCGGCTTGCAAACATTGCTGGAGGGTCGCCAACCTTGCAATCCAACCGAGTGGCTGCAGAGAAACAACATGGAAGACAAAAGAGCATGTCCACTGAAGTAGTGACTACCAGTGTGATGGGAAACGGTTATATGGCTCCAGAAGCACTGAAAGTGGTGAAGCCATCACAGAAATGGGATGTTTACTCATATGGAGTGATATTGTTGGAAATGATCACAGGAAAACCATCTATTGTCCAATTTGGGAACTCAGAAATGGACCTTGTTCAGTGGATTCAGTTCTGCATTGAGGAAAAGAAGCCACTCGTGGAGGTTTTAGACCCTTACTTGGCTGAAGATGCAGATAAGGAGGAGGAGATTATTGGAGTTTTGAAGATTGCAATGGCTTGTGTCCATAGCAGCCCTGAAAAGAGACCTACGATGAGGCACGTGCTTGATGCTTTGGATAGATTGACTATTTCCTCTGATTGA 2139 0.4404 MFPFVLLFYFFLLCFNSIAPLVHSLNAEGSVLLTLKQSLTDPQGSMSNWNSSDENPCSWNGITCKDQNVVSISIPKRKLNGSLPSSLGSLSQLRHVNFRNNKLFGDLPAQLFQAQGLQSLVLYGNSFSGPVSSEIQNLRYLQTLDLSQNFFNGSLPASIVQCKRLKLLVLSQNNFSGPLPDGFGTGLSSLERLDLSFNHFNGSIPSDLGNLSSLQGTVDLSHNHFSGSIPASLGNLPEKVYIDLTFNNLNGPIPQNGALMNRGPTAFIGNPGLCGPPLKNSCGPDTPSASSPPSFPFIPNNYSADGNGSMGSEKNKGLSKGAVVSIVVGDIIGICLLGLLFSFCYSRVCGFNQDLDEDGVNKGSKGRKECFCFRKDESEVLSDNNVEQYDLVPLDSHVTFDLDELLKASAFVLGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIATLRAYYWSVDEKLLIYDYISNGSLDTAIHGKAGLLTFAPLSWSYRLKIMKGTARGLVYLHEFSPKKYVHGDLKPSNILLGQDMEPHISDFGVGRLANIAGGSPTLQSNRVAAEKQHGRQKSMSTEVVTTSVMGNGYMAPEALKVVKPSQKWDVYSYGVILLEMITGKPSIVQFGNSEMDLVQWIQFCIEEKKPLVEVLDPYLAEDADKEEEIIGVLKIAMACVHSSPEKRPTMRHVLDALDRLTISSD 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03780 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Viun7g03780 712 PANTHER OS05G0588300 PROTEIN 134 706 - -
Viun7g03780 712 Pfam Leucine Rich Repeat 141 160 IPR001611 GO:0005515
Viun7g03780 712 Pfam Leucine Rich Repeat 189 211 IPR001611 GO:0005515
Viun7g03780 712 SMART serkin_6 412 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03780 712 Gene3D Phosphorylase Kinase; domain 1 375 482 - -
Viun7g03780 712 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Viun7g03780 712 Pfam Protein kinase domain 413 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03780 712 Gene3D Transferase(Phosphotransferase) domain 1 483 711 - -
Viun7g03780 712 FunFam Leucine-rich repeat receptor-like protein kinase 25 181 - -
Viun7g03780 712 ProSiteProfiles Protein kinase domain profile. 407 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03780 712 FunFam Leucine-rich repeat protein kinase family protein 483 710 - -
Viun7g03780 712 FunFam Leucine-rich repeat receptor-like protein kinase 390 482 - -
Viun7g03780 712 SUPERFAMILY Protein kinase-like (PK-like) 412 704 IPR011009 -
Viun7g03780 712 CDD STKc_IRAK 413 707 - -
Viun7g03780 712 Gene3D Ribonuclease Inhibitor 19 78 IPR032675 -
Viun7g03780 712 Gene3D Ribonuclease Inhibitor 79 285 IPR032675 -
Viun7g03780 712 SMART LRR_typ_2 90 114 IPR003591 -
Viun7g03780 712 SMART LRR_typ_2 187 211 IPR003591 -
Viun7g03780 712 SMART LRR_typ_2 138 162 IPR003591 -
Viun7g03780 712 FunFam Leucine-rich repeat receptor-like protein kinase 189 284 - -
Viun7g03780 712 SUPERFAMILY L domain-like 27 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03780 Viun-Chr7 38127020 38129746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03780 6 712 Receptor kinase-like Gene Family AT2G01210 67.733 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun7g03780 Pkinase 4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03780 - - gmx:100792873 1241.87