Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03764 ATGGTAGATGAGTCAATTTCACTGATAAAACATGTTCCTAGTTTTGCAAGAGGTTTTAGAATTCTGCTAGTGCATGATGACAAAATTTCACGTTCGTATCTCTCAGCAATTCTTCAGCTATATTCTTTCAAAGTTACTGCTACAAATAATGCTTCCGCTGCTGCATCCATGATCTGGCATCAAGAAGGAACGTTCAAACTGATCATGGCTAAAGCTGATATGGCTGACATGGATATCCCTTCTTTTCTGGATGTAGCAGTTGAAAAGGATGTTCCTATCATCTTTATCTACTCTGGAGTGTTTGATGATGTAAATAGGAAAGCTTTAGCTACAGGATTGTGTTATTTTCTTCAGGAGCCAATCACTCCCAATGATCTTCGATATCTCTGGCAACATCTGTATCACTCAAGACCCTGTTCACCCAAAAACACTCAAAACGCAGGCTTACAGAATACCCAGGTGACAAAAACCCAATGTCAGGTTCTTGGAGAAAAAAGAGGAAGAAGCGATGCTGATACATGGACCCTTAACAACACAATGCCAACCACACAGTGCAAGGGTAACAAAGCATACGGAAAAAGAAACCATGATCACTGTGAAGGCAAGAAAAAAGAAAAGAGATATGTTTTGCACGAAAAGCCAGATTCTTTGGGATCAGCCATGATGAACATTAACAACCCCAATGAACATTTCAGAATGTCCGAGTCCAAAAAACGTTTGAGTGTTTGGACTCCTGAGTTGCATCAGAAGTTTTTAGATGCAGTGAAAGAATTAGGAGAGAACATTGCTCGTCCAAAACAGATATTAGTTCGGATGAATGTCAGTGAATCTTACCTCACTGTTCGCCAAGTTGCAAGTCATCTGCAGAAATATAGATTGCGGCTGAAAGTTGAAGAGAGCTCTCGCAATTCTTATTTGCCTAAAGTATCATCCTCAAGACACAAACCCAACTCTTCCTCATCTGAAGGATCGCAAGCCAACACTGAAAAAAGAGCTTGGGATCCAGATCTCGCAGCACCAAACGTTTTCTTGAACGTGAACCATAATCAAGATCAGATTCCAGTGAACAGTGTGGGAATGGAATTCACAGATTCTTGGGATTCACAACCAATGACAGGGGCTTCAGTGGATTCGAACATACCTAGGACTGAGTTCTGTGATTTCGTAGAAACGTTTCTGGAAGACTCTGACTGTTTTAATTTGTATAAATATGAAACCAATCTTGCTGCTGTTGATCAATGCGCTGAGATGCTAAGAAAAGTTCTAGAAGGAAGGGGTTCCTCATTGATTGAACTTTCAAATGGAAGCATAAATTTGGAGCAAAATGAGAAACTTTCTGTTATGTAG 1347 0.4016 MVDESISLIKHVPSFARGFRILLVHDDKISRSYLSAILQLYSFKVTATNNASAAASMIWHQEGTFKLIMAKADMADMDIPSFLDVAVEKDVPIIFIYSGVFDDVNRKALATGLCYFLQEPITPNDLRYLWQHLYHSRPCSPKNTQNAGLQNTQVTKTQCQVLGEKRGRSDADTWTLNNTMPTTQCKGNKAYGKRNHDHCEGKKKEKRYVLHEKPDSLGSAMMNINNPNEHFRMSESKKRLSVWTPELHQKFLDAVKELGENIARPKQILVRMNVSESYLTVRQVASHLQKYRLRLKVEESSRNSYLPKVSSSRHKPNSSSSEGSQANTEKRAWDPDLAAPNVFLNVNHNQDQIPVNSVGMEFTDSWDSQPMTGASVDSNIPRTEFCDFVETFLEDSDCFNLYKYETNLAAVDQCAEMLRKVLEGRGSSLIELSNGSINLEQNEKLSVM 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03764 448 Gene3D - 15 137 - -
Viun7g03764 448 ProSiteProfiles Response regulatory domain profile. 20 134 IPR001789 GO:0000160
Viun7g03764 448 SUPERFAMILY Homeodomain-like 237 296 IPR009057 -
Viun7g03764 448 FunFam Two-component response regulator 234 298 - -
Viun7g03764 448 Pfam Myb-like DNA-binding domain 242 292 IPR001005 -
Viun7g03764 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 243 296 IPR017930 -
Viun7g03764 448 PANTHER - 11 309 - -
Viun7g03764 448 MobiDBLite consensus disorder prediction 304 328 - -
Viun7g03764 448 Gene3D - 234 297 - -
Viun7g03764 448 MobiDBLite consensus disorder prediction 304 330 - -
Viun7g03764 448 NCBIfam myb-like DNA-binding domain, SHAQKYF class 241 294 IPR006447 GO:0003677
Viun7g03764 448 SUPERFAMILY CheY-like 17 146 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03764 Viun-Chr7 38045163 38047944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03764 15 296 Response Regulator Gene Family AT2G25180 30.742 5.88e-29 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Viun7g03764 Myb_DNA-binding 6.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03764 - - vun:114191433 895.96