Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03759 ATGGAGAAGGTTTGTGAGTTCTGCACGGCCCTGAGGCCACTTGTTTACTGTAAAGCTGATTCGGCATATCTTTGTCTATCCTGTGATGCGAAGGTGCATTTGGCAAATGCTTTGTCCGGCCGGCACCTCCGGAACCTTGTGTGTAACTCATGTGGAGATCGTGTTGCTTATGTTGTATGTTTGGACCACAAAATGTTAATCTGTCGAGACTGTGATCAAAAGTTGCACAATAATTCTTTATCACACCAGAAACGAGCTATCAGAAGTTTCATAGGTTCCCCTTCTGCTAAAGACTTTGCAGCACTCTGGGGGTTTGAATTGAATGAGATTGAAAACTGTGCCAATCAGGATCAGTTTGATTCAGTTTCTTGTGTTTCTGCGGAATTGAATGTAGCACAAGTCTCAGGAAAGCCTGACATTCAAAATGGGGTCCCTTCACTGCTAGCTGGGGCCAAACTTGATGAGGGATCGACCAGTCAACAAGGTCAGATATTGCACAATCATCAAGAGCGTCAAACTATTGTGCAGCAGATTATTGATCTAAAATGGCTCCAACAAATTGAGGAGATTGATTATTCTGCAAAGATCAGCAGGCTAAAAGAAAAAAAATCATCACCTTCATTATATCACACTCTTAAGAAATTGGACGAAAAATTCAATGGTCAATCACAAAATTCCCAGGATTTGGCTACTAATGTTCTGGAAAAATACTGTCCTACTGTGGAGCCGAGTACAGAAACTGTGCCCTCTACTTTTTCTCAACTTGATAATTTATCTTCATCTTCTATTATCGATCTTCCCTTGCATGGAGAATTGTTCTGGACGTGCAAAAGTCCACTTCGAAGTAATCAGCTGTGGTCCCAAAATATTCAAGACCTTGGTATATGTGAAGAACTTGTTCGTCTGGATGATTTTAACATCCCTGATGTTGACTTAACTTTCCAAAACTTTGATGAATTATTTGGAGGAGATAAGGATCCAATTAGAATATTGTTTGATGATCAAGATGTCTCCTGCTCTTCTTTAGAGAAGGATAAGTCAATCGACAAGTCAGATATTGACAATCTAAGTGCAATGGAGGATTCTTCGGCTTCTGCATCCATTAATCTCTCCCAATATGATCATGAGAACAAGCATATGAACCCTCTCGGCCAGTACTGTCCAAAAAGCATGGATCCTACGCATGCGACTCAACCATTTGATTCAAATATACCCTTATCTGTTTTGGGATTCACTTTGGAAAGCAGTTTCACAGGTCATGAGGACAGTGTCCTTTCTCCCTACAGTGAAGGGAAGGCTTATTCAGGCATGAGAAGCAATTTCGACTTCTATCCAGGAAACCTGGAGCTAATGTAA 1356 0.4093 MEKVCEFCTALRPLVYCKADSAYLCLSCDAKVHLANALSGRHLRNLVCNSCGDRVAYVVCLDHKMLICRDCDQKLHNNSLSHQKRAIRSFIGSPSAKDFAALWGFELNEIENCANQDQFDSVSCVSAELNVAQVSGKPDIQNGVPSLLAGAKLDEGSTSQQGQILHNHQERQTIVQQIIDLKWLQQIEEIDYSAKISRLKEKKSSPSLYHTLKKLDEKFNGQSQNSQDLATNVLEKYCPTVEPSTETVPSTFSQLDNLSSSSIIDLPLHGELFWTCKSPLRSNQLWSQNIQDLGICEELVRLDDFNIPDVDLTFQNFDELFGGDKDPIRILFDDQDVSCSSLEKDKSIDKSDIDNLSAMEDSSASASINLSQYDHENKHMNPLGQYCPKSMDPTHATQPFDSNIPLSVLGFTLESSFTGHEDSVLSPYSEGKAYSGMRSNFDFYPGNLELM 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03759 451 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Viun7g03759 451 CDD Bbox1_BBX-like 4 44 - -
Viun7g03759 451 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 412 - -
Viun7g03759 451 SMART bboxneu5 48 87 IPR000315 GO:0008270
Viun7g03759 451 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03759 Viun-Chr7 38025322 38031964 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03759 1 328 C2C2-CO-like Transcription Factor Family AT1G68190 38.369 2.13e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03759 - - vun:114191779 892.878